Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01803 ATGGGTGTGAAGTTTAGAGATGCAGTGATGATAATAGTTATAATGAGTGCTTCAATGTTTTCAGTGAGCATGGCCAACAAGGATTGGTTCCCTGCTTTCAACTACACCGATTGGTGGTCCAGATTTGGGAATCATCATCAAAACAAAACACAGCAACAACCATCCCAGATTCTTGTCGGTGGTTCTGAGCATTGGCACTTTGGCTACAACTACAATGATTGGGCCATCAAGAGCGCCCCTTTCTACCTCAATGATACTCTAGTGTTCAAATATGATGCTCCAAATGCCACCAGTTTCCCACACAGTGTGTACATGTTCAAAAGCTATGGGAGCTTCTTGAAGTGTGACATAAAAAAGGCTAAGATGTTGGCAAGTCCGGTTCAAGGTGGAGGAGAGGGGTTTAAGTTTGTGTTGCACAAATGGCAGCCTCATTACTTCGCCTGCGGTGAGAGAAATGGCTTCCATTGCAACAATGGCACCATGAAGTTTGCTGTCATGCCAATGTTCCGTCCCTTCTGGCAGCGGCCATGA 531 0.4539 MGVKFRDAVMIIVIMSASMFSVSMANKDWFPAFNYTDWWSRFGNHHQNKTQQQPSQILVGGSEHWHFGYNYNDWAIKSAPFYLNDTLVFKYDAPNATSFPHSVYMFKSYGSFLKCDIKKAKMLASPVQGGGEGFKFVLHKWQPHYFACGERNGFHCNNGTMKFAVMPMFRPFWQRP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01803 176 Gene3D - 53 168 IPR008972 -
Vian10g01803 176 SUPERFAMILY Cupredoxins 56 167 IPR008972 -
Vian10g01803 176 Pfam Plastocyanin-like domain 65 159 IPR003245 GO:0009055
Vian10g01803 176 PANTHER GLYCINE-RICH PROTEIN-LIKE 4 171 - -
Vian10g01803 176 ProSiteProfiles Phytocyanin domain profile. 55 169 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01803 Vian-Chr10 29855325 29855996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01803 58 165 Miscellaneous Gene Families AT3G27200 30.556 6.39e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01803 - - gmx:100813442 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01803 10 29855325 29855996 Vian10g01803 10 29855325 29855996 ECH