Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01679 ATGCCCGAGTTTTGCGTGACAGGAGGTACTGGCTTCATCGCATCGCACTTAATCAAGACCTTATTAGAAAAGGGTCATACGGTGACGACCACCGTGAGAAACCCAGAGGATGAGGAGAAGGTTGGTTTTCTGAGCGAACTCAGTGGAGCGAAAGAAAGACTGAAGATTTTGAAAGCAGATCTCTTAGTAGAAAGAAGCTTTGAGAAGGCAGTGACAGGAGTTGATGGTGTCTTTCATACGGCTTCACCTGTGCTTGTTCCATTCGACGAAAACGTTCAGAAGAATTTGATTGATCCATGCGTAAAAGGAACTTTGAACGTGCTTAACTCCTGCTTAAAGGCAAATGTGAAACGTTTTGTGCTCACTTCTTCTTGCTCTTCCATAAGATACCGTGATGATGTGCAACAACTCTGTCCTCTTAATGAATCTCATTGGACAGACCTTGAGTACTGCAAACGCTACAACTTATGGTATGCATATGCAAAGACGGTGGCAGAAAGAGAGGTTTGGAGAATAGCAAAAGAAAATGAAATTGATGTAGTTGTGGTTAACCCATCTTTCGTTGTTGGTCCACTCCTTGCACCACAACCAACAAGTACACTCCTCTTGATACTTGCCATTGTCAAAGGCATGAAAGGGGAATATCCTAATACAACAGTGGGGTTTGTCCACATAAATGATGTTGTAGCTGCTCACTTGTTGGCTATGGAAGATACCAATGCATCTGGAAGGCTTATTTGTTCAAGCACAGTAGCTCATTGGTCACAAATCATTCAAATGCTTCGTTCCAAATATCCCTCCTACCCATTTGAAAACAAGTGCAGCAGCCAGCAGGGAGATGATAACCCACACAGCATGGACACCACCAAAATTACTCAGTTGGGGTTTCCTCCATTCATAACCCTAGATAGGATGTTTGATGATTGCATTACAAGTTTTCAAGACAAGGGTTTTCTGTGA 960 0.4292 MPEFCVTGGTGFIASHLIKTLLEKGHTVTTTVRNPEDEEKVGFLSELSGAKERLKILKADLLVERSFEKAVTGVDGVFHTASPVLVPFDENVQKNLIDPCVKGTLNVLNSCLKANVKRFVLTSSCSSIRYRDDVQQLCPLNESHWTDLEYCKRYNLWYAYAKTVAEREVWRIAKENEIDVVVVNPSFVVGPLLAPQPTSTLLLILAIVKGMKGEYPNTTVGFVHINDVVAAHLLAMEDTNASGRLICSSTVAHWSQIIQMLRSKYPSYPFENKCSSQQGDDNPHSMDTTKITQLGFPPFITLDRMFDDCITSFQDKGFL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01679 319 FunFam Dihydroflavonol reductase 1 319 - -
Vian10g01679 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 310 - -
Vian10g01679 319 Gene3D - 3 319 - -
Vian10g01679 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 317 IPR036291 -
Vian10g01679 319 CDD FR_SDR_e 5 296 - -
Vian10g01679 319 Pfam NAD dependent epimerase/dehydratase family 5 240 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01679 Vian-Chr10 28103843 28107540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01679 5 318 Miscellaneous Gene Families AT5G19440 41.925 7.37e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01679 - - gmx:100808002 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01679 10 28103843 28107540 Vian10g01679 10 28103843 28107540 ECH