Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01633 ATGGCTTCTTCTCCTTCCTTAGAAAACACAAAACAAAGGGGTGGTGAGAAACCAATTCCACTTCACGAAAACGTTTTGCAGAAGCATGCTGCTTTCTTTGACAAGAATCACGATGGTGTCATTTATCCATGGGAAACTTTTCAAGGGTTACGTGAAATTGGAAATGGAATATTTTCGTCGGTTGGACTTTCTCTGTTCATCAATTTGGGTCTTAGTCAAACTACTCGTCCAGGAAAATTTCCATCTTTACTTTTTCCAATTGAAATTAAGAACATCCATTTGGGCAAACATGGCAGTGACACTGGAGTCTATGATACCGAAGGAAGGTTTCTTCCTTCAAAATTTGAAGACATTTTCACCAAACATGCACATACACAACCAAATGCCCTCACATATGATGAGCTAATGCAGATGATACAAGCAAATAGAGAACCCAAAGATATCAAAGGAAGGATTGGTGGCTTGGTAGAATGGAAGATCCTTTACAAAGTTGCCAAAGACAAGAGTGGTTTACTACAAAAGGAAACAATCCGAGGTGTTTATGATGGAAGCTTGTTTGAAATGTTGAAAAAGGAACATTCTACACACACAAAAAAGTGA 600 0.3833 MASSPSLENTKQRGGEKPIPLHENVLQKHAAFFDKNHDGVIYPWETFQGLREIGNGIFSSVGLSLFINLGLSQTTRPGKFPSLLFPIEIKNIHLGKHGSDTGVYDTEGRFLPSKFEDIFTKHAHTQPNALTYDELMQMIQANREPKDIKGRIGGLVEWKILYKVAKDKSGLLQKETIRGVYDGSLFEMLKKEHSTHTKK 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01633 199 PANTHER PEROXYGENASE 3-RELATED 13 196 IPR007736 -
Vian10g01633 199 SUPERFAMILY EF-hand 26 181 IPR011992 -
Vian10g01633 199 Pfam Caleosin related protein 23 189 IPR007736 -
Vian10g01633 199 ProSitePatterns Protein kinases ATP-binding region signature. 53 79 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01633 Vian-Chr10 27427752 27430076 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01633 1 199 Acyl Lipid Metabolism Gene Families AT1G70670 58.291 9.75e-82 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01633 K17991 - gmx:100800915 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01633 10 27427752 27430076 Vian10g01633 10 27427752 27430076 ECH