Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01537 ATGAGAAGCTCGTGGTTCAATAAGTTATCCATCATTATTGGCCATAGATCCCCGGTGAACTGGTTACTCTTGTGCCTAATCAGCCTGCTTCTGCTGATTTTTGTTCTAGGTTCATCTTCTTCTAATATTGTTGATTTGGCACCTCATGTTCCGGTGTCTCTCATATACACAAATTATAGGAAGGTTAAGGAGCAAGCGGCGGTTGATTATTTAGAGTTAAGGTCTGTGGCAAGGGGTATCTCTAGACAAAGAGAATTTGACCTCTGTGGCAAGGAAAGAGAGAATTTTGTGCCTTGTTACAATGTTTCAGCCAACTTGGTAGCAGGTTTTAAAGAAGGAGAAGAGTTTGATAGGCATTGTGAACTGTTAGTTGAAGCAGAAAGGTGTTTGGTTCGTCCTCCTACGGAATATAAAATTCCCTTCCAGTGGCCAACTAGCAGGGATGTTATATGGAGTGGAAATGTGAAGATAACCAGAAACCAATTTCTTTCATCTGGAAGTATGACCAAAAGGTTAATGCTTCTAGAAGAGAACCAAATTGCTTTCCGCTCGGAGGATGACGGTGTGAAAGATCACTCTCGCCAAATTGCAGAGATGATTGGCTTGGGAAGTGATAATGAATTTCCTCAAGCTGGTGTTCGCACTATACTAGACATTAATTGTGGATTTGGTAGCTTTGCAGCTCATTTGGCATCACTGAATATAATGACAGTTTGCGTTGCTGCATATGAGGCAACAGGTAGCCAGGTTCAGCTGCTTCTTGAGAGGGGCCTTCCTGCTGTGATTGGCAACTTCGTTGCAAGAGAACTTCCATTTCCTTCATTGTCATATGGCATAGTTCACTGTGCTCAATGTGGCATCATTTGGGATGGAAAAGTTGGAATTTTCCTCATAGAAGTTGACCGTGTTCTTAAACCTGGAGGATACTTTGTGTTAACCTCGACCCCAAGCAGGTCAGATGGAAGTTCATCAAAAGTGAAAAGTAGGAATATGTTGAATCCAATGAAAGAACTGGCCCATCAACTCTGTTGGACTCTTCTATCTCAGCATGATGAGCTATTCATCTGGCAGAAAACTGCTGACGTTAATTGCTATGCATCTAGAAAGAAGCATGCTATACCATTATGCAAAGAATATGATGATGTTCAGTCATATTATCGGCCTCTTCAACCATGCATACGTGGGACCTCTAGCAAGCGCTGGATTGCAATACAGAACAGATCCGCTGGATCTGATTTGAGTGCAGAGGACCTTAAAATTAATGGAGTTCAATCTGAAGATTATTTTGAAGACTTGGAATTCTGGAGATCAACTCTCAAGAACTATTGGTCTTTGCTTACACCACTAATTTTCTCTGATCATCCGAAGAGGCCGGGAGATGATGATCCATTACCTCCATTTAACATGATTCGTAATGTAATGGATATGAGTACTAAATATGGGGGGTTGAACACTGCCCTTCTGGAAGAGAACAAATCAGTTTGGGTCATGAATGTTGTTCCTGCTACAGTTTCTAATTCACTTCCTCTTATACTGGATAAAGGTTTTGTTGGTGTTGTGCATGACTGGTGTGAACCCTTCCCAACGTACCCCCGGACGTATGATATGCTTCACGCAAGTGGACTTCTTTCTCATCTCACTTCAGAGAGATGCAGCATGGTGAACCTATTCTTGGAGATGGACAGAATACTGCGTCCAGAGGGATGGGTCATTCTTTCTGATAACATGCAAATTATTGAGATGGCTCGCACACTCGCGGCACAAGTACGTTGGGAAGCAAGGGTAATTAACCTTGAGAACGGAAGTGACCAGCGGCTTCTTGTTTGCCAGAAACCATTCCTGAAAAAATGA 1851 0.4241 MRSSWFNKLSIIIGHRSPVNWLLLCLISLLLLIFVLGSSSSNIVDLAPHVPVSLIYTNYRKVKEQAAVDYLELRSVARGISRQREFDLCGKERENFVPCYNVSANLVAGFKEGEEFDRHCELLVEAERCLVRPPTEYKIPFQWPTSRDVIWSGNVKITRNQFLSSGSMTKRLMLLEENQIAFRSEDDGVKDHSRQIAEMIGLGSDNEFPQAGVRTILDINCGFGSFAAHLASLNIMTVCVAAYEATGSQVQLLLERGLPAVIGNFVARELPFPSLSYGIVHCAQCGIIWDGKVGIFLIEVDRVLKPGGYFVLTSTPSRSDGSSSKVKSRNMLNPMKELAHQLCWTLLSQHDELFIWQKTADVNCYASRKKHAIPLCKEYDDVQSYYRPLQPCIRGTSSKRWIAIQNRSAGSDLSAEDLKINGVQSEDYFEDLEFWRSTLKNYWSLLTPLIFSDHPKRPGDDDPLPPFNMIRNVMDMSTKYGGLNTALLEENKSVWVMNVVPATVSNSLPLILDKGFVGVVHDWCEPFPTYPRTYDMLHASGLLSHLTSERCSMVNLFLEMDRILRPEGWVILSDNMQIIEMARTLAAQVRWEARVINLENGSDQRLLVCQKPFLKK 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01537 616 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 95 611 IPR004159 GO:0008168
Vian10g01537 616 FunFam probable pectin methyltransferase QUA2 178 359 - -
Vian10g01537 616 CDD AdoMet_MTases 215 313 - -
Vian10g01537 616 Gene3D Vaccinia Virus protein VP39 506 604 IPR029063 -
Vian10g01537 616 Gene3D Vaccinia Virus protein VP39 170 359 IPR029063 -
Vian10g01537 616 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 348 IPR029063 -
Vian10g01537 616 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 462 594 IPR029063 -
Vian10g01537 616 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 74 614 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01537 Vian-Chr10 26161589 26164855 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01537 K23870 - gmx:100781425 1077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01537 10 26161589 26164855 Vian10g01537 10 26161589 26164855 ECH