Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01404 ATGGGTACTTCTGGCGACAGTTTTCTCCAAGTTCTCTTCAAGAACTTCGATGTTCTTGCTCTACCCTTGGTCACCCTGGTTTACCCTTTATATGCTTCGATAAAGGCCATAGAGAGTAGGTCTAGTATTGATGATCAGCAATGGCTCACTTATTGGGTTCTCTATTCTTTGATCACTCTGTTTGAGCTCACATTTTCCAAAGTTCTTGAAGTGCTTGCCATTTGGCCTTATGCCAAGTTGATACTTAGTTGCTGGCTAGTTCTTCCGCAGTTCAGTGGGGCAGCACATGTTTATAGGCACTATGTTAGACCATTCTATATGAATCCACAAATGCCACAAATGCCAAAGTTTCCAGGAGCCTCTCAAATGTGGTATGTTCCTCGAAAGAACATATTTAGTAAGCAGGATGATGTCCTTTCTGCTGCTGAGAGGTACATGGAAGAGCATGGAACTGAAGCATTTGAAAGACTCATAACCAAGGCTGACAGAGAAGCTAGAGGACGGAGGAACGGAAGTTATATGATCTTTGATGATGATTATATATATTAA 549 0.4171 MGTSGDSFLQVLFKNFDVLALPLVTLVYPLYASIKAIESRSSIDDQQWLTYWVLYSLITLFELTFSKVLEVLAIWPYAKLILSCWLVLPQFSGAAHVYRHYVRPFYMNPQMPQMPKFPGASQMWYVPRKNIFSKQDDVLSAAERYMEEHGTEAFERLITKADREARGRRNGSYMIFDDDYIY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01404 182 PANTHER HVA22-LIKE PROTEINS 22 149 IPR004345 -
Vian10g01404 182 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01404 Vian-Chr10 24075087 24077886 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01404 K17279 - gmx:100775940 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01404 10 24075087 24077886 Vian10g01404 10 24075087 24077886 ECH