Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01350 ATGGAGTTATTCACCAAAACCAACGTGGTGAGGCTGCGGAGCCACCTCGACAAGTATCTCGTGGCCGACGCAGACGGCAGCCAGGTCCGCCAGAGCCGCAAGGCCTCCGGCCGGGGAGCGCGGTGGACGGTAGAGGAGATCACAGACGGAGAAAGCAAAAAGGTACGCCTCAGGAGCTACCACGGAAGATACTTAACGGCGACGGAGGCGCCGTTTCTGTTTGGGATGACAGGAAAGAAGGTGCTCCAGAGGGATTTCGAGCCCGGCGCGGACTTCAAGCACGACTGGGAAGTGACACGCGACGGGTTCCAGGTGAAGTTGATGAGCTGGAGTGGAAAGTTCCTGCGCGCGAACGGAGGGACGCCGCCATGGCGGAGCAGCGTGACGGTGGACGAGCCGCACAGTTCGGCGACGAAGGATTGGGTTCTGTGGGACGTGGAGACTGTGGAGGCGGTGGAGGAGTTGGTGGATGATTTGTGCGACAGCACGGTTTCGTCTGTCGCTTCCGATGATTTCTCCGTCGATTCGGAACCAGCGTCGCCGATGTCCGTTTTTTCCCTCAAGTCGCCGCCGGCGAGGCGGAACTCGAACCTGATGCTGCAGGCAATAACTTCCAACAAGTTCAGAAATGGCATGGACTTCTTCCACCGCGCCAAGGCGGTGCGCCTCCGCAGCCACCACGACAAGTACTTGCTGGCGGAGGACGACGAGGAGTCCGTCACGCAAGGCCGCAACGGCTCCTCCAAGAGCGCGCGCTGGCTCGTCGAATACGTTCCCGAATACGACAACATAATTCGCCTGAAAAGCTGTTACGGAAAATACCTCACAGCCTCCAACATCAACTTCCTCCTGGGCATGACGGGCCACAAGGTCCTCCAGACCCTCCCTCAGAGGCTCGACTCCTCCGTCGAGTGGGAGCCCATCAAGGACGGAGGCCGCGTCAGGCTCAAGACTCGCTACGGCAACTTCCTCCGCGCCAATGGGGGCGTGCCGCCCTGGAGAAACTCCGTCACGCACGATATTCCTCACAGGACCGCCACCCAGGACTGGATCCTCTGGGACGTGGAGGTCGTCGAGATTTATGTCAACTCTCCGGCGAATAGCAGTAAACCCTCTGCTCCCCCGTTGCCAGGTTCCGACCCTGTTCCAGTCCTGGCCAGCGCGCCGGTTCCCCCACCACCATCATTGTCTGCCAGCTTTACAAGGCAACAGTCGAATGAATTGAATGGTTTGTCACAGAAGATGGAAGGGCGGATTATTTACTACAATATTGCTGAAGAGAACGGGGAGGTGTTGGATGAAGGTTCGCAGGGCTATTCTTTGATTTTCAAAGGGAATGGAGTTGAAGAATTGACTCGAAAGTTTGAGGAAGAGACAGGTCTAGAGGGAATCATTGTATGTAATCGGAGTCCTTTGAATGGAAGGCTTTATCCTCTTCGCTTGCAGCTTCCACCAAACACCGTGACCATGCGAGTTGTTTTGGTTCTTCCCATGTCAAATGTGGCAAGAGACTTAGAGGCAGAAGGTTTACTGTGA 1536 0.5677 MELFTKTNVVRLRSHLDKYLVADADGSQVRQSRKASGRGARWTVEEITDGESKKVRLRSYHGRYLTATEAPFLFGMTGKKVLQRDFEPGADFKHDWEVTRDGFQVKLMSWSGKFLRANGGTPPWRSSVTVDEPHSSATKDWVLWDVETVEAVEELVDDLCDSTVSSVASDDFSVDSEPASPMSVFSLKSPPARRNSNLMLQAITSNKFRNGMDFFHRAKAVRLRSHHDKYLLAEDDEESVTQGRNGSSKSARWLVEYVPEYDNIIRLKSCYGKYLTASNINFLLGMTGHKVLQTLPQRLDSSVEWEPIKDGGRVRLKTRYGNFLRANGGVPPWRNSVTHDIPHRTATQDWILWDVEVVEIYVNSPANSSKPSAPPLPGSDPVPVLASAPVPPPPSLSASFTRQQSNELNGLSQKMEGRIIYYNIAEENGEVLDEGSQGYSLIFKGNGVEELTRKFEEETGLEGIIVCNRSPLNGRLYPLRLQLPPNTVTMRVVLVLPMSNVARDLEAEGLL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01350 511 SUPERFAMILY Actin-crosslinking proteins 216 358 IPR008999 -
Vian10g01350 511 Gene3D - 220 357 - -
Vian10g01350 511 MobiDBLite consensus disorder prediction 366 402 - -
Vian10g01350 511 Pfam Domain of unknown function (DUF569) 212 353 IPR007679 -
Vian10g01350 511 Pfam Domain of unknown function (DUF569) 1 144 IPR007679 -
Vian10g01350 511 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 212 495 - -
Vian10g01350 511 FunFam BnaC05g19630D protein 5 147 - -
Vian10g01350 511 Gene3D - 5 147 - -
Vian10g01350 511 MobiDBLite consensus disorder prediction 370 396 - -
Vian10g01350 511 SUPERFAMILY Actin-crosslinking proteins 7 147 IPR008999 -
Vian10g01350 511 FunFam BnaC05g19630D protein 216 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01350 Vian-Chr10 22953564 22960668 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01350 - - gmx:100811752 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01350 10 22953564 22960668 Vian10g01350 10 22953564 22960668 ECH