Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01342 ATGAAGAGGGGCAGTAAAGTAGACCTTTTTGTGCTACCCAACAGGCTCACACTGCTTCAGATTTTCATGGTGGTGATGCTCTTTTACTTGCTCTTCATGAGCTTCGAAATTCCTCTCGCTTTCAGAGCCGGGTTGGGTTCCGATAATGGCGCTGTTTTTCTCACCGACGCATTACCCATGTCCATGCCGCTCTTGCTTGAAGAACCGAAACATGGGGTACAAATTCCCGGGCCCAGGGGGTTGAAGTTGGAGAAAGTTTCCTCCTTGAGGTTCAACCGGAGCTTCTCGGAGGGTTCGGAGCTGCACAAGGTGGCGCGGCACGCATGGGTCTCTGGGGAGAAGCTCTGGGGGGATGTGGTGAGTGGGAAAGTGAAGAGCTTTGCAAAGGTGACGGTTGAAAACGGGTCGGACTCGTGCCCGAATTCGGTTTCGGTTTCCGGGGCGGAGTTTCGGGGGAAAGGGGTGATGGTGCTGCCGTGTGGACTGACGCTCTGGTCGCACGTGACGGTGGTGGGGACGCCGCGGTGGGCGCATGCGGAGAGGGACCCTAAGATAGCGGTTGTGAGGGACGGTGGTGAGGCGGTGATGGTGTCGCAGTTCATGATGGAGTTGCAGGGATTGAAGGCTGTGGACAAAGAGGAACCGCCGAGGATTCTGCATTTCAATCCGAGGCTGAGAGGGGATTGGAGTGGGAGGCCTGTGATTGAGCAGAATACTTGCTACAGGATGCAGTGGGGTTCTGCTCTCAGGTGTGAGGGGTGGAAGTCTCGAGCGGATGAGGAAACTGTTGATGGACATGTAAAATGTGAAAAGTGGATTCGGGATGACAACAATCGTTCTGAAGAGTGGAAGGCAACATGGTGGCTAAACAGATTGATAGGACGAAAAAAGAAGGTGACAATTGACTGGCCATATCCTTTTGCAGAGGGTAAGTTATTTGTTCTCACCATAAGTGCTGGCTTGGAAGGTTACCATGTTAGTGTGGATGGAAGGCATGTGACATCCTTTCCCTATCGCACGGGATTTGCTCTTGAAGATGCGACTGGACTATCCATAAATGGGGATGTTGATGTGCACTCTATATTTGCTGCTTCCTTACCTACATCACATCCTAGCTTTGCTCCACAGATGCATCTTGAATTGCTTCCTCAGTGGAAAGCTCCTCCACTTCACAATGTGAATGTGGATCTTTTCATCGGTATTCTTTCTGCTGGAAATCATTTTGCTGAACGGATGGCTGTGAGGAAGTCCTGGATGCAGCACAAGCTAATAAAATCTTCAAATGTTGTGGCTCGATTTTTTGTAGCCTTGCATGCAAGGAAGGATATAAATGTGGACATAAAGAAAGAAGCAGAGTATTTCAATGATATTATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACCATAGCTATCTGTGAATATGGGATTAATACAGTGGCTGCTAAGTATATCATGAAGTGTGATGATGACACATTTGTCAGAGTGGATTCTATAGTAAATGATGTAAGACAAGCTCTAACTGATAGAAGTCTCTACATGGGAAATATGAATTACCACCACAGGCCTCTTCGCTACGGAAAATGGGCTGTAACTTATGAGGAATGGGTAGAGGAAGAGTATCCTATATATGCCAATGGTCCAGGTTACATAGTCTCAGCTGACATTGCGCAATTCATTGTATCTGAATTCGAGAAGCGCAAATTAAAATTATTTAAAATGGAGGATGTGAGCATGGGAATGTGGGTGGAGCAGTTCAACAGCACAATAGCAGTAGAGTATGTGCACAACTTGAAGTTCTGTCAATTTGGGTGTGTTGAAGAGTACTACACTGCACATTACCAATCACCAAGACAAATGACATGCATGTGGGAAAAATTGCAACATCAAGCAAAACCTCTATGTTGCAACATGAGATGA 1932 0.47 MKRGSKVDLFVLPNRLTLLQIFMVVMLFYLLFMSFEIPLAFRAGLGSDNGAVFLTDALPMSMPLLLEEPKHGVQIPGPRGLKLEKVSSLRFNRSFSEGSELHKVARHAWVSGEKLWGDVVSGKVKSFAKVTVENGSDSCPNSVSVSGAEFRGKGVMVLPCGLTLWSHVTVVGTPRWAHAERDPKIAVVRDGGEAVMVSQFMMELQGLKAVDKEEPPRILHFNPRLRGDWSGRPVIEQNTCYRMQWGSALRCEGWKSRADEETVDGHVKCEKWIRDDNNRSEEWKATWWLNRLIGRKKKVTIDWPYPFAEGKLFVLTISAGLEGYHVSVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIFAASLPTSHPSFAPQMHLELLPQWKAPPLHNVNVDLFIGILSAGNHFAERMAVRKSWMQHKLIKSSNVVARFFVALHARKDINVDIKKEAEYFNDIIIVPYMDHYDLVVLKTIAICEYGINTVAAKYIMKCDDDTFVRVDSIVNDVRQALTDRSLYMGNMNYHHRPLRYGKWAVTYEEWVEEEYPIYANGPGYIVSADIAQFIVSEFEKRKLKLFKMEDVSMGMWVEQFNSTIAVEYVHNLKFCQFGCVEEYYTAHYQSPRQMTCMWEKLQHQAKPLCCNMR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01342 643 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 332 591 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian10g01342 643 FunFam Hydroxyproline O-galactosyltransferase GALT2 278 362 - -
Vian10g01342 643 FunFam Hydroxyproline O-galactosyltransferase 388 631 - -
Vian10g01342 643 Pfam Galactoside-binding lectin 155 362 IPR001079 GO:0030246
Vian10g01342 643 Gene3D - 387 638 - -
Vian10g01342 643 FunFam Hydroxyproline O-galactosyltransferase GALT4 153 271 - -
Vian10g01342 643 Gene3D - 194 362 - -
Vian10g01342 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 156 362 IPR013320 -
Vian10g01342 643 CDD GLECT 158 362 IPR001079 GO:0030246
Vian10g01342 643 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 154 364 IPR001079 GO:0030246
Vian10g01342 643 Pfam Galactosyltransferase 410 590 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian10g01342 643 SMART Gal_bind_lectin_2 158 363 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01342 Vian-Chr10 22847854 22851820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01342 6 643 Glycosyltransferase AT1G74800 59.763 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01342 K20843 - gmx:100803219 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01342 10 22847854 22851820 Vian10g01342 10 22847854 22851820 ECH