Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01341 ATGGATCAGTCACCATTCATGACTCCTCCGAGAGGATCTTTGTCATCCAGCATTGGAGACGCTTCAGAGCTTGAGGTCAATCTCACACTCAGTGATAGGCTCAAGGTTTTCAAAAGCTCTTCCTTTGATCCCAATAACTATGTCGCCTCCAAATCCCGCACCATGAACGAAAAGGAGATAAGACACTTGTGCTCTTATCTTATTGACTTGAAGAAGGCTTCAGCAGAAGAAATGCGTAAAAGTGTTCTTGCTAACTACTCAGCCTTCATACGGACGTCCAAAGAGATATCTGATCTTGAGGGAGAGTTGGTTTCCATGAGAAATCTTCTATCCACCCAGGCTGCTTTGGTTCATGGTTTAGCAGATGGGTGCGAGCTTAGTCCCATGATTAGTGGAAATGAAGATTCAGACATGGATGACATACTAGATGAAAAAACAGAACTATCCAACACAGAAAAATGGCTAATAGGATATTTAGAAACCCTTGAGGTTCTATTAGCGGAGAAAAGAGTGGACGAAGCAATGACTGCTTTGGAAGAAGGAGAAAAAATGGTACAAGAAATTACTCAAGTGGGAACTTTAAGCCCAATTTTATTTGAGGCATTGCAAGATGCTATTGTTGAACACAGACAAAAGCTAGCAGATCAACTAGCAGAAACTATCTGCCAGCCATCAACTAGCAGTGCAGAGATTCGATCAACAGCGTTGTCATTGAAAAAACTTGGGGATGGTCCTCGTGCTCACACATTACTACTAAGTTCTCGCCAAGGAACATTACAACGTACCATGAAAATCCTTCAATCCAGCAATTATGGTGGGGTTGGGCCATTTACTGCTGCCCTTTCACAGCTTGTTTTTTCCACCATTTCACAAGCAGCATCAGATTCTCTGTCAGTGTTTTCTGAAGAACCTGCATATACGTCTGAGCTAGTAACTTGGGCAGTTGCAGAGGCTGAGAAATATTCTGCTCTCCTTAAGAAGTGCATTCTTGCCTCTACAGCTGCAGCAGGAGGTTTGAGAGTTGCATCTGAATGTGTTCATGTTTGCATGAGTCACTGCTATCTGCTAGAGACTACTGGCCTAGCCCTTTCCCCTGTCCTAATAAAATTTTTTAGACCGTTTGTTGAGCAAGCACTGAAAACAAATTTGAAAAGAATTGAACAAAGTAGTTCTGCACTGGCTGCTGCAGAGGATTGGCTACTTTCTTATGCACCAACCAGTAACAGGTCTTCCGGCCAACCTCCATCTTCTCATAGTAACTTAGGTTTGCTCCAACCAAAACTTTCAGGCAGTGCTCACAAATTCAACTCAATGGTTCAGGAACTATTTGAAGATGTTGGACCTCTTGAAATACTGCAATTGGATGTTCTTGCAGTTGAAGGCCTTCTACAAGTGTTCAACTTCTATGTCCACTTGCTGGTAAATGCATTGCCAGGATCAGTGGTAACTGAGAACATTGAAGGGCACAGAATTGTTAAGCTTGCCGAGACTGAAGCACAGCAGATTGCATTGATGGCAAATGCAATATTACTGGCAGATGAACTGCTTCCACGTGCTGTTGTCAAGCTTTCACATAGCACCAAAGGTGATGACTCTCAGAAAAAAGGATCAGACAAACAGCGTGAACTCAAGAAAAGGCTCCAACGTGAAGTTGATCGCCTGCGTGACAGCTTTTGCCGGCAACATGCTCTTGAACTTATATTCACAGAAGAAGGAGAAGCTCGCCTCAATGCCTTAATATATTTGGGAATGGATGGTAACGTAGAGCAGCCTGAATGGTTTCCTTCTCCAATCTTTCAGGAAATTTTTGCTAAGCTTACCGAAGTGGCAAGCCTTGCAGCAGACATGTTTGTAGGAAGGGAAAGATTTGTGACTGTTTTATTGATGAGACTAGCAGAAACAGTGGTGCTGTGGCTTTCTGATGACCAAGCCTTCTGGGAAGAGGTTGAGACAGGATCAACACCTTTGGGTCCCATAGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTTCATCCCAAGGTCGTTACTTATCTCGTCATCTGCATCAAGCTATTAAAAACATTATTGAAAGGGCTATTAATGCTCTTGCTGCTACAGGTCTAGATCCCAACAGTGTCTTGCCTGAGGATGAATGGTTTGTTGAAGTGAGTGAAATTGCTATAAAGATGTTAACTGGTAGAGCTGCCTTTGATAGTGTAGAGGAAGATATTCCTAGCCCCACTTCATCCGTCCAAACATAG 2253 0.4288 MDQSPFMTPPRGSLSSSIGDASELEVNLTLSDRLKVFKSSSFDPNNYVASKSRTMNEKEIRHLCSYLIDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELVSMRNLLSTQAALVHGLADGCELSPMISGNEDSDMDDILDEKTELSNTEKWLIGYLETLEVLLAEKRVDEAMTALEEGEKMVQEITQVGTLSPILFEALQDAIVEHRQKLADQLAETICQPSTSSAEIRSTALSLKKLGDGPRAHTLLLSSRQGTLQRTMKILQSSNYGGVGPFTAALSQLVFSTISQAASDSLSVFSEEPAYTSELVTWAVAEAEKYSALLKKCILASTAAAGGLRVASECVHVCMSHCYLLETTGLALSPVLIKFFRPFVEQALKTNLKRIEQSSSALAAAEDWLLSYAPTSNRSSGQPPSSHSNLGLLQPKLSGSAHKFNSMVQELFEDVGPLEILQLDVLAVEGLLQVFNFYVHLLVNALPGSVVTENIEGHRIVKLAETEAQQIALMANAILLADELLPRAVVKLSHSTKGDDSQKKGSDKQRELKKRLQREVDRLRDSFCRQHALELIFTEEGEARLNALIYLGMDGNVEQPEWFPSPIFQEIFAKLTEVASLAADMFVGRERFVTVLLMRLAETVVLWLSDDQAFWEEVETGSTPLGPIGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIERAINALAATGLDPNSVLPEDEWFVEVSEIAIKMLTGRAAFDSVEEDIPSPTSSVQT 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01341 750 Gene3D - 274 378 IPR042560 -
Vian10g01341 750 SUPERFAMILY Cullin repeat-like 145 379 IPR016159 -
Vian10g01341 750 PANTHER EXOCYST COMPLEX COMPONENT 8 16 749 IPR033961 GO:0000145|GO:0006887
Vian10g01341 750 Pfam Exocyst component 84 C-terminal 153 363 IPR032403 -
Vian10g01341 750 Pfam Vps51/Vps67 37 115 - -
Vian10g01341 750 Coils Coil 537 557 - -
Vian10g01341 750 Coils Coil 199 219 - -
Vian10g01341 750 Gene3D - 143 265 IPR042561 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01341 Vian-Chr10 22786589 22793117 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01341 K19986 - gmx:100787854 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01341 10 22786589 22793117 Vian10g01341 10 22786589 22793117 ECH