Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01339 ATGGGAGCGTGTGTTTCAACTCCACAAGGGTGCGTGGGAGGGAGGTTGAGCTCTTCCAAGAAGAAAACGAGGAAGAGGAGGAGAGAGGGACTCAGGAGAAGAGTTACTTCACGGTTGTGTAAGGGATCATTGGACAAGGTTGATGTGGCAGGGTTGCCTGATTGTTCCTTTGCCAACCCCACTTTCCAAGGAAGTATTGAAGAGGCATGGTTTGATTCGGTTGCAGTATTTGACTCTGACTGTGATGATGATTACCAGAGTGTTCCTGATGATGTTGTATCTCTAAGTGGGATTGAAGGAGGTTCTGTATTGAGTTTTCCATCTTCAAGAAATGCCAACCATGGAGTTTCCACAGATCAAGTTCAGAAACAGGAGTTACAGACAAGCCATTTTGCTAATATCTCTGAGGCTTCCAGAAGTTCAGATGTCCAATATTCTGGTGTAGATGTCATTGATTCTCCACGTGAGCCTGTGTTCCTTGACGAAATTTCCTCAGTGGACGCAAACTCCAACAAGGATGATGGACTTTTGGATAACTGTGGGATTCTTCCTAACAATTGTTTGCCATGTCTTGCGTCTACCATTTCTTCTGTTGAAAAGAGAAGATCATCAAGTTCTAGTCCTCCTAATGCAAGGAAGAAGACTGCTACAAAAGTTTCCTTCAAATGGAAAGAAGGACATGGGAATGCTACTCTATTTTCCTCAAAAACGCTTCTACAAAGACCAATTGCAGGTTCTCAAGTACCCTTTTGTCCAATTGAGAAGAAAATGCTTGATTGTTGGTCACAGATTGATGCAGGCACTTTCAAAGTTCGAGGAGTAAATTATTTCAAGGATAAGAAAAAGGACTTTGCTCCTAACTATTCTGCATATTACCCATTTGGTGTAGATGTTTTCTTGTCCCCACGGAAAGTAGACCACATAGCTCGCTTTGTGGAACTTCCTGTTATGAGTTCCTCTGGGAAATTTCCTCCCATACTAGTTGTAAACGTTCAGGTTCCACTCTATCCTGCCACACTTTTTCAAGGAGAAACTGATGGTGAAGGAATGAGCATTGTTTTGTACTTTAAACTTTCGGAAAGTTACTCCAAGGAACTTCCACTGCCTTTTCAAGAAAGCATCAGAAGATTGATGGACGATGAAGTTGAAAAGGTAAAGGGTTTTCCTGTAGATACAATTGCACCCTTCAGGGAAAGGTTGAAAATTTTAGGCCGTGTTGTCAACTTGGAAGATCTTCATTTGAGTGCAGCAGAGAGGAAGCTTATGCAAGCTTACAATGAGAAACCTGTTCTTTCACGTCCCCAACATGAGTTTTTCACGGGTGAAAATTACTTTGAGATTGATTTGGATATGCATAGATTCAGTTATATATCCAGGAAAGGGTTTGAAGCATTCCTTGACAGATTGAAGATTTGCACGCTAGATGTTGGCCTCACAATTCAGGGCAACAAACAAGAGGAGCTGCCAGAACATGTGTTATGTTGTATTAGATTAAATGGCATTGATTTCATGAATTACCAACAACTGGGGCTAACTCAGGATCCCCTCTGA 1551 0.4184 MGACVSTPQGCVGGRLSSSKKKTRKRRREGLRRRVTSRLCKGSLDKVDVAGLPDCSFANPTFQGSIEEAWFDSVAVFDSDCDDDYQSVPDDVVSLSGIEGGSVLSFPSSRNANHGVSTDQVQKQELQTSHFANISEASRSSDVQYSGVDVIDSPREPVFLDEISSVDANSNKDDGLLDNCGILPNNCLPCLASTISSVEKRRSSSSSPPNARKKTATKVSFKWKEGHGNATLFSSKTLLQRPIAGSQVPFCPIEKKMLDCWSQIDAGTFKVRGVNYFKDKKKDFAPNYSAYYPFGVDVFLSPRKVDHIARFVELPVMSSSGKFPPILVVNVQVPLYPATLFQGETDGEGMSIVLYFKLSESYSKELPLPFQESIRRLMDDEVEKVKGFPVDTIAPFRERLKILGRVVNLEDLHLSAAERKLMQAYNEKPVLSRPQHEFFTGENYFEIDLDMHRFSYISRKGFEAFLDRLKICTLDVGLTIQGNKQEELPEHVLCCIRLNGIDFMNYQQLGLTQDPL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01339 516 MobiDBLite consensus disorder prediction 14 33 - -
Vian10g01339 516 PANTHER CW14 PROTEIN 1 511 - -
Vian10g01339 516 MobiDBLite consensus disorder prediction 18 33 - -
Vian10g01339 516 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 261 502 IPR009769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01339 Vian-Chr10 22757287 22761848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01339 - - gmx:100819425 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01339 10 22757287 22761848 Vian10g01339 10 22757287 22761848 ECH
Vian10g01339 10 22757287 22761848 Vian10g01339 10 22757287 22761848 PCT