Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01325 ATGTCTTCCAGGCGCCACTCCCTCGGCGGACCGCCGCCGCACACTGCCGCCGAGTCGGCTCAGAACCTCCGACAGCGAGTCATCACGTGCCTCAACAAACTCTCCGACCGCGACACACTCGCCGGCGCAGCCGCAGAACTTGAGTCCATCGCCCGAACCCTAAGCCATGACTCATTCTCCTCTTTCCTCTCCTGCATTCACAACACGGATTCTTCTTCCAAATCTCCTGTTCGCAAACAATGCGTTCATCTCTTAAACATTCTCTCGCGCTTCCACGGGGAAGCTCTCTCCTCGTTTCTTCCGAAGATGCTTGCAACTGTGCTCCGTCGCCTCCGTGACACCGACTCCGCCGTGCGATCCGCATGTGTGGACGCAGTCGCGGAGATGTCGACGAGGATCACGCGGCCGCCGTTCGCCACCGCGTTCCTGCGGCCGCTCATGGACGCGCTGGTGCAGGAACAGGATGTCAACACGCAGATCGGCGCCGCGCTGTGCCTCGCGGCGGCTGTCGAGGCGGCGCCGGACCCCGACGCGGAGGCGCTCCGGCGGAGCGCGCTGCCGCGGCTGGGGAAGCTAGTGAAGAGCGACGTGTGCAGAGCGCGGGCGGCGCTGCTAGTGCTGATCGGAAGCGTGGTCGCCGTCGGCGGTGCGTCGAGCCGTGGTGCGGTGAGCTGGCTCGTGCCGTGCCTGGTCGAGTTCCTTGGTAGTGAGGACTGGACGGTGAGGAAAGCCGCGGCCGAGGCACTGTTGAAGGTGGCTTCCGTAGAGAAAGACTTGGCCTCGCAGCACAAGGTTTTGTGTTTAGATTCGTTGCAGAATAGGAGGTTTGATAAGATCAAAGTAGTTCGAGAAACTATGAATCGTGCTTTGGAGACGTGGAGGGAGGTAACTGACGATGCTCCCGCGATGGTGAAGTCTGAATGTAATTCCGTCTGTGGCTCAGATTATGGCAAAGGTCAGCGTGTCACTAAAAGTTCACCCAGTGTTGGCTCTAAGTCTTCTAAAACAATCCCTGCCAACAGGTCTCCTCCATCTGGGGTTTCATTCATGTCCTCCGCAAAAGGAGAAAATTTTCTAAATAGTAATGAGAAGAATTCAAAAATGGCAACATTGCACAAGCATGATGATGAGAAATCCTCAGTTGAGAAACTTGAAGGTCTGTTTTCGAGGTCCTCCCACTCAAATATGTCTAAGGAAGATGCTATTAAAAGGTGCGATGTAGAACATTCTAGCCCAACCCCGTATCAAAATGGAGCAAATTCAAGGGCAGAGATAAAGCGTGTTCTCTTTAGCAAGATGTCTGATGAAAAAGTGAAGAGATTCAGTGGTTCAAAATCTCGTGTGGTTCCATGTTACGATGACACAAATGTTGTAGACAATAGTGCAAATGATGTTTGTGACAATCCACAAGATGTTGAGGATTTTTCTTTGATTCGGGAACAACTTATTCAAATTGAAAACCAGCAATCAAATCTATTAGACACCCTTCAGAGATTTATTGGAAGCTCCCAAAGTGGTATGAATTCTTTGGAGTCACGAGTACATGGTCTAGAGATGGCCCTGGATGAAATTTCATATGATTTGGCAGTTTCAAGCGGGAGGTTTTCCTATACTGATGTCACAGATGACACCTGTTGCAAGCTACCTGGTACTGACTTTTTGAGTTCTAAATTTTGGAAGAAAACAGAAGGTCGGTATACCACATCAAAGTTCTCTTTAGGAAACATAGCATCAACAAATGGTGTGCATAATGGAACAGCCAATAAAGATGGAGGTAAAGAAATATTAACTCCAAATAACAGTAGATTGCAACATGGTAAGGGTGAATATTTTGTGAACCAATTGGCTGAAGTTCAAAGCAATTTTAAAGGGCTTCATACATATAAAATGTCTACAAACAGGGTCCAAGATGCCATGAGAGCACAAACTGATAATGCCAGCAGATATGGTGGCATTCACCCAGCTACTGAAGCACCGAGAAACCATAATGTCAGGTCATCTGTATAG 2007 0.4973 MSSRRHSLGGPPPHTAAESAQNLRQRVITCLNKLSDRDTLAGAAAELESIARTLSHDSFSSFLSCIHNTDSSSKSPVRKQCVHLLNILSRFHGEALSSFLPKMLATVLRRLRDTDSAVRSACVDAVAEMSTRITRPPFATAFLRPLMDALVQEQDVNTQIGAALCLAAAVEAAPDPDAEALRRSALPRLGKLVKSDVCRARAALLVLIGSVVAVGGASSRGAVSWLVPCLVEFLGSEDWTVRKAAAEALLKVASVEKDLASQHKVLCLDSLQNRRFDKIKVVRETMNRALETWREVTDDAPAMVKSECNSVCGSDYGKGQRVTKSSPSVGSKSSKTIPANRSPPSGVSFMSSAKGENFLNSNEKNSKMATLHKHDDEKSSVEKLEGLFSRSSHSNMSKEDAIKRCDVEHSSPTPYQNGANSRAEIKRVLFSKMSDEKVKRFSGSKSRVVPCYDDTNVVDNSANDVCDNPQDVEDFSLIREQLIQIENQQSNLLDTLQRFIGSSQSGMNSLESRVHGLEMALDEISYDLAVSSGRFSYTDVTDDTCCKLPGTDFLSSKFWKKTEGRYTTSKFSLGNIASTNGVHNGTANKDGGKEILTPNNSRLQHGKGEYFVNQLAEVQSNFKGLHTYKMSTNRVQDAMRAQTDNASRYGGIHPATEAPRNHNVRSSV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01325 668 MobiDBLite consensus disorder prediction 1 21 - -
Vian10g01325 668 FunFam ARM repeat superfamily protein 23 213 - -
Vian10g01325 668 MobiDBLite consensus disorder prediction 317 353 - -
Vian10g01325 668 Gene3D - 13 404 IPR011989 -
Vian10g01325 668 SUPERFAMILY ARM repeat 18 296 IPR016024 -
Vian10g01325 668 ProSiteProfiles HEAT repeat profile. 226 264 IPR021133 -
Vian10g01325 668 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 21 591 IPR033337 GO:0005874|GO:0008017
Vian10g01325 668 MobiDBLite consensus disorder prediction 647 668 - -
Vian10g01325 668 MobiDBLite consensus disorder prediction 319 353 - -
Vian10g01325 668 Pfam HEAT repeat 226 254 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01325 Vian-Chr10 22539880 22543642 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01325 - - gmx:100781440 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01325 10 22539880 22543642 Vian10g01325 10 22539880 22543642 ECH