Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01317 ATGAACGGGATGGAGTGCGCGGCGAGAGGGAGCGGAAAACGGTGCGGCGGTGCCGCCACGCGTCTGTGCACTCGCTGCGAAGCCGTCGCATATTGCTCTCTTTCTCACCAGATTGCACACTGGAGTCGTCACAAACACGAGTGTGATAGGTTGCAACAGCAGATGAAGAGTGTTGAAGTCCTCAACGATTTTCCCTTCACTTTCTCTCGCGAAGCCACGTTTCAGGTTTGTGTGAAGCACGAAGGTAGATGTTCATTTTTGAGCAACAGAGGACTTCATAAAGTGGGAATGTGGCTGCATGAATGCGGTTGTGGGGCGACATCTGCTTCATTTGATTGTTTAGGTTTAAATAATGGTTGGGATCTCCCAAGTGTTTTATGTCCATGTGGGCCAAACTCTCTGGTATTAGAGCAATTGCATAGTTGGAGAGACTACTATAAGTGGAGAAGCATCCCACTAGACTCGCCTGTTGCTTTGCTTCTTCATTGGCCGCTTACAATATATCATGCTGCTCGTCTTGTTGGAATTACAGCCTTGAATCCTGAAATCAATGAAAAGTTGTACATACATTACCTTGGACCTGAGAAAGAGTTGCTACAACTTCTTGTGTTTGGAGAATTACTGGCACTCTTCCCTGGTTTTCATGTTCATATAGAACTTGTTGGACCTGCAATTCCTCCTCAAAGGGATGGTGAGAAAATTCAAATTTCAAAGTATGCTTGTTGCAATGAAGATGAGTGTGAGTGCAAAATAGCAATTAAAAATACATATCCTGAAACAGAGTCTGGTTCAGCTGTGACATTGCAGCTTTGGCGAGGATTCTATCATGACCGATATAGAGATATTGTTAAGGATTCCTTTCCTCACCTAATAATTGCTCCAAATGGTGGCATTGCTGCTTATTCCAGTTGGTTACCATGTATTGAGTTAATTGAAAAGATTGGCGTCCCAGCTGTTTTTACTGATTATTGCGAGGAAGCATGTCATCTTGCAGCAAGTTGTATTAAGACTGTGTCTGACCGTCCTCCTAAATTGCCAGTTCAGTTAAATCCTTTCAGGCAGCCCATAGCCGTGGAAGACAGCGTGCTATTATTGCCCTGCTACTCGAATTGCTTTCTTTTTGGAATGTAA 1131 0.4403 MNGMECAARGSGKRCGGAATRLCTRCEAVAYCSLSHQIAHWSRHKHECDRLQQQMKSVEVLNDFPFTFSREATFQVCVKHEGRCSFLSNRGLHKVGMWLHECGCGATSASFDCLGLNNGWDLPSVLCPCGPNSLVLEQLHSWRDYYKWRSIPLDSPVALLLHWPLTIYHAARLVGITALNPEINEKLYIHYLGPEKELLQLLVFGELLALFPGFHVHIELVGPAIPPQRDGEKIQISKYACCNEDECECKIAIKNTYPETESGSAVTLQLWRGFYHDRYRDIVKDSFPHLIIAPNGGIAAYSSWLPCIELIEKIGVPAVFTDYCEEACHLAASCIKTVSDRPPKLPVQLNPFRQPIAVEDSVLLLPCYSNCFLFGM 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01317 376 Pfam MYND finger 14 48 IPR002893 -
Vian10g01317 376 PANTHER ZINC ION BINDING PROTEIN 5 376 - -
Vian10g01317 376 ProSiteProfiles Zinc finger MYND-type profile. 12 48 IPR002893 -
Vian10g01317 376 SUPERFAMILY HIT/MYND zinc finger-like 14 53 - -
Vian10g01317 376 Gene3D - 5 55 - -
Vian10g01317 376 Pfam MSS51 C-terminal domain 164 360 IPR046824 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01317 K24081 - gmx:100808017 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01317 10 22360895 22364610 Vian10g01317 10 22360895 22364610 ECH