Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01209 ATGGCGTTGTTGGAGGAGAAGCGAGTGGAGGAAGAGTTATCGTACCCGATTATGTTGGCGGAGCGAGTTCGCTCGGCGGTGGACGAGGCCGACTCATTCAAAGCTGAGTGCTCGGAGGTGTGGAAGCAGGTCGATCGCCTCCTCCAAATGCTCCGAACCCTCGTCCGCTTTGCCACGGCCACCAACACCTCCGCCGCGTCGCCGCCGCTCTACGAGCGTCCTATCCGCCGCGTCGCTGCCGAGACGGCGAAGAATCTCGACCGCGCTCTGGCCCTCGTGCGCAAGTGCAAGCGCCGGAGCATCCTCCACCGTGTTGTCTCCATCGTTGGCGCCGCCGATTTCCGCAAAGTCCTGGCCCACCTGGACGCGTCCGTGGGTGATATGAAGTGGCTCCTGAGCATCTTCGATGCCGACGGCGGCATTGTCCTCTCGCTCCCTCCGATAGCCAGCAACGACCCCATTTTATCTTGGGTATGGTCTTTCATCGCTTCCCTTCAAATGGGTCAATTAAATGATAGAATTGAGGCTGCTAATCAACTTACTTCTTTAGCTCAAGATAACGATAGGAATAAGAAGATCATAGTTGAGGAATGTGGGGTGCCTCCTTTGTTGAAGCTTTTCAAGGAAGGCACTTCCCCTCTTGCTCAAATTGCTGCTGCCGGTGCTTTGTGTCATTTGGCTAATGATTTGGATAGGGTTAGAGTGATTGTGGGTGAGCATGGTGTGCCTGCTGTTGTGCAGGTTCTCAGTGACTCCCCCATGAGGGTTCAGACCCTGGCTGCCAATTTGGTTGCCAGGATGGCCAAGCATGACCCTGTGGCTCAGGAGGATTTCGCCCGCGAGAACGTGATTAGACCGCTTGTGACACTCTTGTCGTTTGACACCTTTGTGGATGATCAATGGGATCATTTGGGGAAGCAAAGTATTCACTCCATTGTTCAGATTAATAAGGAGTTGGGAAAGGGTAGCCGAGGAGGTCGCCATTTTGCGAATTCCTACTCGAATTCGTATTTTTTTGCGGAGGGAAGTAGCCGGGGAGGGAATCATAAGAAGGAGAGGGAGAATGAGGATCCTGAGGTGAAGCTTCAGCTAAAGGTTAGTTGCGCTGAGGCGTTGTGGATGCTTGCGCGAGGGAGTGTGACCAACAGTAGGAAGATAACTGAGACCAAAGGGATGCTTTGTTTGGCTAAGATTGTTCAGAATGAGCAAGGAGAGCTTCAGTTTAATTGCTTGATGACGATAATGGAGGTAACTGTAGCTGCTGAATCCAATGCTGACCTTCGTCGAGCAGCGTTTAAAACCAATTCTCCTGCTGCTAAGACTGTTGTGGAACAGCTGCTGAGGATAATTAAAGAGGTGGATAACCCTGCATTGCAAATTCCAGCTATGAAGTCCGTTGGTGCGTTGGCTAGGACGTTTCCCGCTAGAGAGACTCGGGTAATTGAACCTCTAGTTGCACAGATGAGTCATAGAAATGCAAAAGTAGCAGATGAGGCAGCACTTGCTCTTACCAAATTTGCTTCTCCGGATAATTTCCTACACGTTGAGCATTCTAAGACGATAATTGAATTCAATGGCATCCCGGCACTGATGAGACTGCTCAGGAGTAATGAAGTTACCCAGATGCACGATGGGCTAACTCTTCTTTGCTACCTTGCACTTCATGCTGGCAACAGTGAGTCCTTGGAGCAAGCAAGGGTGTTGACAGTGCTTGAAGGTGCAGACAGAACAGTTCTTCCTCAGCATCTAAAGGAATTGGTCTCCAGGGCAATAATCCACCTCAATTTGTATCATGCAGGAATGAATTCTCAAAGGATGTCATATTTGCCTTGA 1833 0.5052 MALLEEKRVEEELSYPIMLAERVRSAVDEADSFKAECSEVWKQVDRLLQMLRTLVRFATATNTSAASPPLYERPIRRVAAETAKNLDRALALVRKCKRRSILHRVVSIVGAADFRKVLAHLDASVGDMKWLLSIFDADGGIVLSLPPIASNDPILSWVWSFIASLQMGQLNDRIEAANQLTSLAQDNDRNKKIIVEECGVPPLLKLFKEGTSPLAQIAAAGALCHLANDLDRVRVIVGEHGVPAVVQVLSDSPMRVQTLAANLVARMAKHDPVAQEDFARENVIRPLVTLLSFDTFVDDQWDHLGKQSIHSIVQINKELGKGSRGGRHFANSYSNSYFFAEGSSRGGNHKKERENEDPEVKLQLKVSCAEALWMLARGSVTNSRKITETKGMLCLAKIVQNEQGELQFNCLMTIMEVTVAAESNADLRRAAFKTNSPAAKTVVEQLLRIIKEVDNPALQIPAMKSVGALARTFPARETRVIEPLVAQMSHRNAKVADEAALALTKFASPDNFLHVEHSKTIIEFNGIPALMRLLRSNEVTQMHDGLTLLCYLALHAGNSESLEQARVLTVLEGADRTVLPQHLKELVSRAIIHLNLYHAGMNSQRMSYLP 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01209 610 Gene3D - 352 578 IPR011989 -
Vian10g01209 610 Gene3D - 11 134 IPR036537 GO:0007166
Vian10g01209 610 PANTHER ARMADILLO REPEAT ONLY 4 8 598 - -
Vian10g01209 610 SMART arm_5 229 269 IPR000225 GO:0005515
Vian10g01209 610 SMART arm_5 468 508 IPR000225 GO:0005515
Vian10g01209 610 SMART arm_5 186 228 IPR000225 GO:0005515
Vian10g01209 610 SMART arm_5 514 554 IPR000225 GO:0005515
Vian10g01209 610 SUPERFAMILY ARM repeat 167 571 IPR016024 -
Vian10g01209 610 Gene3D - 160 329 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01209 Vian-Chr10 20065984 20067816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01209 - - gmx:100779659 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01209 10 20065984 20067816 Vian10g01209 10 20065984 20067816 ECH