Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01199 ATGTGTTGGATAGATTTGGTGGGAGACGTGTTTCCCCTGGAAGAATCAAAGCCTGGGAACACACACTTTTGTTTTGTTCGTGCAAGAACAAGAAGACAAGGCCAATGTGAACAAACTCACTCGGATTTGTCAATAGAAACAAGGAAGACAGATCTCTCAAGCATGAATTTTAGCTTGTGTTTGAGCTCCCCGATCATTTCCATACTTGTACATTTCCTTCTTGTTGCTTCTTTGCTTTGTCCTGTTTGTTCCTCAGAAATGGGCAACACCCCAGTTGCCAATCAGACTTTTAAGCCGCAAGAAGAGGTTCACAAGATGAACATCATAAGAACTCGTCTTCAGCAAATCAACAAGCCCCCTGTTAAGACAATTCAGAGTCCTGACGGTGATGTAATAGACTGTGTGGTGTCTCATCAGCAACCAGCTTTTGATCATCCTATGTTGAAGGGACACAAACCACTGGATCCTCCCGAAAGGCCTAAAGGTCATAACCAAAGGGACCTATTGAGTGAGAATTTTCAGCTATGGACCATGTCAGGGGAGTCATGTCCAGAAGGTACAATTCCAATTAGAAGAACAAAAGAAGAAGACATGTTAAGAGCTAGTTCTGTAAGCAGATTTGGAAGGAAAATAAGCAGGCGTGTTAGAAGGGACACCAGCAGCAATGGCCACGAGCATGCAGTTGGGTATGTGAGTGGAGAACAGTACTATGGAGCAAAGGCTAGCATAAACGTGTGGGCACCCCGTGTGGCAAATCAGGATGAATTCAGCCTGTCCCAAATGTGGGTCATATCTGGTTCATTTGGGGATGATCTCAACACTATTGAAGCTGGTTGGCAGGTCAGCCCTGAGCTATATGGGGACAGATACCCCAGATTCTTTACTTATTGGACGAGTGATGCATATCAAGCAACTGGATGCTACAATTTACTGTGCTCAGGTTTTGTTCAAACTAACAATAGAATTGCAATTGGGGCTGCAATTTCTCCAACTTCTTCCTATGCCGGTGGGCAATTTGATATTAGTTTGCTGATTTGGAAGGATCCAAAGCATGGGAATTGGTGGCTTGAATTCGGATCCGGAATCTTAGTCGGGTATTGGCCATCGTTCTTGTTCACACACCTGAGGGATCATGCAAGCATGGTGCAATTTGGTGGAGAAGTGGTGAATTCAAGGCAATCAGGCTCTCACACTTCAACCCAAATGGGTAGTGGTCATTTTGCAAGTGAAGGGTTTGGAAAAGCTTCATACTTTAGGAATATGCAAGTTGTGGATTGGGACAACAACTTGGTACCCTTGTCAAATCTTAGGGTTCTAGCAGATCACCCCAATTGCTATGACATTCAAGGAGGGATTAATAATGTTTGGGGGAATTACTTTTACTATGGTGGACCTGGGAGAAATGTGAGATGTCCCTAA 1419 0.4405 MCWIDLVGDVFPLEESKPGNTHFCFVRARTRRQGQCEQTHSDLSIETRKTDLSSMNFSLCLSSPIISILVHFLLVASLLCPVCSSEMGNTPVANQTFKPQEEVHKMNIIRTRLQQINKPPVKTIQSPDGDVIDCVVSHQQPAFDHPMLKGHKPLDPPERPKGHNQRDLLSENFQLWTMSGESCPEGTIPIRRTKEEDMLRASSVSRFGRKISRRVRRDTSSNGHEHAVGYVSGEQYYGAKASINVWAPRVANQDEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDRYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYAGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEVVNSRQSGSHTSTQMGSGHFASEGFGKASYFRNMQVVDWDNNLVPLSNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGRNVRCP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01199 472 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 109 468 - -
Vian10g01199 472 Pfam Neprosin 253 465 IPR004314 -
Vian10g01199 472 FunFam Putative carboxyl-terminal proteinase 245 364 - -
Vian10g01199 472 Pfam Neprosin activation peptide 123 230 IPR025521 -
Vian10g01199 472 Gene3D - 245 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01199 Vian-Chr10 19847071 19850699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01199 - - gmx:100776639 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01199 10 19847071 19850699 Vian10g01199 10 19847071 19850699 ECH