Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01195 ATGGCCACGTTAGTCCCTTCTTCTTCCATTTTCCGACCAACATTGGTTCGGTGCACCAACGAGCGCCGGGCGCTGTTTAATCGCATTGCTCCTGTCTATGATAACCTGAATGACTTGCTGAGCCTTGGGCAACACCGGATTTGGAAGCGAATGGCGGTGTCGTGGACTGGTGCGAAATTGGGAGATCGTGTGTTGGATGTGTGCTGCGGAAGTGGGGATTTGTCATTTCTCTTGTCCGACAAAGTAGGCTGTGATGGCAAGGTCATTGGTCTTGATTTCTCGAAGGATCAGTTATCGATTGCTTCATCCCGGCAACAATTGCTTTCAAAGAAGTGCTTCACGAATATTGAGTGGCTTGAAGGTGATGCACTTGACTTGCCATTTATGGATGGTTGGTTTGATGCTATCACTATGGGCTATGGTCTTCGAAATGTGGTTGATAAACATAAGGCAATGCAGGAAATTTTCCGTGTCCTAAAAGCCGACTCTACAGTGTCTATACTGGACTTTAATAAAAGCAATGAGTCACTAACTTCTGCAATTACGGAATGGATGATTGACAATGTTGTTGTACCTGTTGCGTCTGGTTATGGTCTTTCAGAGGAATACATATACCTTAAAAGTTCAATAAGAGAATTTTTAACAGGAAAGGAATTGGAGAAACTTGCCTTGGAAGTAGGATTTTCTGATGCCAGACATTACGAGATTGGTGGAGGCATCATGGGGTGTCTGGTAGCTAAGCGTTAG 747 0.4458 MATLVPSSSIFRPTLVRCTNERRALFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWTGAKLGDRVLDVCCGSGDLSFLLSDKVGCDGKVIGLDFSKDQLSIASSRQQLLSKKCFTNIEWLEGDALDLPFMDGWFDAITMGYGLRNVVDKHKAMQEIFRVLKADSTVSILDFNKSNESLTSAITEWMIDNVVVPVASGYGLSEEYIYLKSSIREFLTGKELEKLALEVGFSDARHYEIGGGIMGCLVAKR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01195 248 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 13 248 IPR004033 GO:0008168
Vian10g01195 248 Pfam ubiE/COQ5 methyltransferase family 24 242 - -
Vian10g01195 248 CDD AdoMet_MTases 63 160 - -
Vian10g01195 248 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 33 48 IPR023576 GO:0008168
Vian10g01195 248 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 11 248 IPR004033 GO:0008168
Vian10g01195 248 PANTHER METHYLTRANSFERASE 32 231 - -
Vian10g01195 248 NCBIfam ubiquinone/menaquinone biosynthesis methyltransferase 24 247 IPR004033 GO:0008168
Vian10g01195 248 Gene3D Vaccinia Virus protein VP39 28 248 IPR029063 -
Vian10g01195 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 17 240 IPR029063 -
Vian10g01195 248 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 21 248 IPR032904 GO:0042372|GO:0052624
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01195 59 185 Acyl Lipid Metabolism Gene Families AT3G18000 29.134 1.18e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01195 K23095 - gmx:100789470 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01195 10 19808756 19812154 Vian10g01195 10 19808756 19812154 ECH