Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01188 ATGGCAGCTGCAGAAGAAGTACCCATCCACGGTGATATCCTAGAGGCAATATTATCCCACGTGCCACTCATCGACCTTGTCCCAGCCTGTCACGTGTCAAACTCATGGAAGCGTGCGGTTTCCTCCTCTCTCGCACATCTCCGCCCCATTAAGCCATGGCTCATCGTCCTCACCCAGAGCCCACGCGACGCGCACGTGACAAAGCTGCACGGTTACGACCCTCGCTCCCACGTGTGGCTCGAGATAAAAAACCACACGTGTCCTCACTCCTCCCCGGTGCGCTCCTCTCACTCCTCGTTACTCTACACGCTCACCCCCGCCGAGTTCGCCTTCTCCCTCGACGCGCTGCACCTCCATTGGCACCACGCGCCATCACCGCGAGTGTGGCGCACTGACCCCATCGTGGCTCGTGTGGGCTCGCGCGTGGTGGTGGCCGGCGGCGCGTGCGAGTTCGAGGACGATCCGCTCGCGGTGGAGATGTACGACGTGGAGAGCCGCGCCTGGGAGACGTGCCCATCCATGCCGGCGCTGCTGAAGGATTCCACGGCATCGTCGTGGCTTTCGGTAGCCATCACCGGAGAGGTTATGCACTTGACGGAGAAACACTCCGGCGTGACGTACTCGTTCGACACTGTGACGAAAAAATGGGAGGGGCCGTTTGATTTGAGACCTGATGAGAGTGTTTTTCACTGCGTCACCGGAAAAATAGGGGAGCGATTGATGGTGGCGGGCTTGGTGGGGGGATTTGGGAACGTGAGAAGCGTGAAGCTGTGGGAGGTTAGGGGGGGATTAGGGTCCGGGATGGTGGAAGTGGGTGAGATGCCAAAAGAGATGGTTTGGAAGGTGATGGGTGGTTCAGAGTTAGGTTCGATGGAGGTGACGTGGATTGGGGACTTTGTTTACGTAAGGAACACTTCCGTTAAGGAGGAATTGGTGGTGTGTGAGGTAGTGAACGGTGTTGGGTGCGAGTGGAGAAGTGTACGGAATGTTGCCGTGAACCACGGCGCGAGAATGGTGGTTTGCGGCGGCGATGTTTGCATGCAGGATCTGCAGCGTGCGGTGATGTCAGGGACACGGACATTTTGCTTGAAACACATGTGA 1101 0.5813 MAAAEEVPIHGDILEAILSHVPLIDLVPACHVSNSWKRAVSSSLAHLRPIKPWLIVLTQSPRDAHVTKLHGYDPRSHVWLEIKNHTCPHSSPVRSSHSSLLYTLTPAEFAFSLDALHLHWHHAPSPRVWRTDPIVARVGSRVVVAGGACEFEDDPLAVEMYDVESRAWETCPSMPALLKDSTASSWLSVAITGEVMHLTEKHSGVTYSFDTVTKKWEGPFDLRPDESVFHCVTGKIGERLMVAGLVGGFGNVRSVKLWEVRGGLGSGMVEVGEMPKEMVWKVMGGSELGSMEVTWIGDFVYVRNTSVKEELVVCEVVNGVGCEWRSVRNVAVNHGARMVVCGGDVCMQDLQRAVMSGTRTFCLKHM 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01188 366 SUPERFAMILY F-box domain 11 50 IPR036047 GO:0005515
Vian10g01188 366 Gene3D - 48 357 IPR015915 GO:0005515
Vian10g01188 366 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 10 300 - -
Vian10g01188 366 Pfam F-box domain 12 46 IPR001810 GO:0005515
Vian10g01188 366 SUPERFAMILY Kelch motif 52 263 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01188 Vian-Chr10 19570103 19571203 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01188 - - gmx:100805691 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01188 10 19570103 19571203 Vian10g01188 10 19570103 19571203 ECH