Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01185 ATGGAAGAGTTGGAGCAGTGGAAGGAACAACTTTCTCACTTGTCGCATCTGGCCATGGATCGTCTTCGCGAGGTTCCCCCGAATCAGCTCTACGCTGCTGCTGCCATCGCGATTTTCACAACGCTGCTTCTTCTCTCTGTACGTTTGTTCAAGCGGTCAAAGTCAAACACCATTGTGTTGACGGGGCTCAGTGGGAGTGGAAAAACTGTTATTTTCTATCAGCTTAGGGATGGCTCTACTCATGAGGGTACCGTTACATCAATGGAGCCTAATGAAGATACTTTTATTCTTCACAATGAGAAAACAAGGAAGGGCAAGATAAAACCTGTTCATATTGTTGATGTTCCTGGCCATTCTCGGCTCCGACCCAAACTGGATGAGTACTTGCCTCAAGCAGCTGGGATAGTTTTTGTGGTTGACGCTTTGGATTTTTTACCGAACTGTCGAGCTGCTTCAGAGTATCTGTATGATCTATTGACTAAAGGAAGTGTTGTGAGGAAGAAGATTCCAGTGCTTATTCTCTGCAACAAAACAGACAAAGTCACTGCTCATACAAAAGAGTTTATCCGAAGACAGATGGAGAAGGAAATAGACAAATTTCGGGCATCAAGAAGTGCGATATCAGATGCTGACATTGCAAATGAGTTCACCCTGGGGGTACCTGGTGAGCCATTTTCTTTTACCCAGTGCTCTAACAAAGTAACAGCGGCAGATGCTTCTGGTTTAACTGGGGAAATATCTCAGCTGGAAGAGTTTATCAGAGAACATGTAAAGCAATAA 780 0.4436 MEELEQWKEQLSHLSHLAMDRLREVPPNQLYAAAAIAIFTTLLLLSVRLFKRSKSNTIVLTGLSGSGKTVIFYQLRDGSTHEGTVTSMEPNEDTFILHNEKTRKGKIKPVHIVDVPGHSRLRPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPVLILCNKTDKVTAHTKEFIRRQMEKEIDKFRASRSAISDADIANEFTLGVPGEPFSFTQCSNKVTAADASGLTGEISQLEEFIREHVKQ 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01185 259 ProSiteProfiles small GTPase Arf family profile. 49 259 - -
Vian10g01185 259 Gene3D - 50 257 IPR027417 -
Vian10g01185 259 PANTHER TRANSFERRIN 30 256 - -
Vian10g01185 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 205 IPR027417 -
Vian10g01185 259 Pfam Signal recognition particle receptor beta subunit 54 234 IPR019009 -
Vian10g01185 259 CDD SR_beta 56 255 IPR019009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01185 1 258 Miscellaneous Gene Families AT5G05670 71.429 3.32e-138 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01185 K12272 - gmx:100800572 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01185 10 19515606 19518184 Vian10g01185 10 19515606 19518184 ECH