Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01171 ATGGCTGGTGCATTCAAAAAGTGTATGATGCTCTGTTGCACGACCAAGATTGACTCGAAGGAAGAGATGGCAGGAGAATCATTCGGCGAAGCAATCGCAAAACTGACCAAGCTTCTCAGTGAAAAGGCTGAACTCGGCGACGTCGCCACCTTAAAGATCTCGCAGCTGACGGCGGAGCTTGAGGCTGCCGGTGCGAAGCGCTGTGTCCCGGAGGAGAGGATCAAAACGGGCTTCATCACCTTTAGGAATGAGAAATTTTTGAGAAATCCTGATCTATATGCCGACCTTGCCAAAGGCCAAAGCCCAAAGTTTATGGTATTTGCCTGCTCGGACTCGAGAGTTTGTCCATCCCATATTCTGGATTTCCAACCCGGTGAAGCCTTTGTGGTCCGAAACATTGCCAACATGGTTCCACCGTATGATAAGACAAAGTATTCAGGAGCTGGGGCAGCCATTGAATATGCAGTCGAGCATTTAAAGGTGGAGAATATTGTAGTTATTGGACACAGTTGCTGTGGTGGTATAAAGGGGCTCATGTCTATCCCAGATGATGGGACCACTGCAAGGCAAGAAGCTGTGAATGTGTCACTGGGGAATCTGTTAAGTTATCCTTTTGTTAGAGCTGGTGTGGAGAACAAATCTCTAGCTTTGAAAGGAGCACATTATGATTTCGTTAATGGCACTTTTGAACTCTGGGATTTGAACTACAAGCTTTTGCCCTCTATATCTATTTAA 735 0.4639 MAGAFKKCMMLCCTTKIDSKEEMAGESFGEAIAKLTKLLSEKAELGDVATLKISQLTAELEAAGAKRCVPEERIKTGFITFRNEKFLRNPDLYADLAKGQSPKFMVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDKTKYSGAGAAIEYAVEHLKVENIVVIGHSCCGGIKGLMSIPDDGTTARQEAVNVSLGNLLSYPFVRAGVENKSLALKGAHYDFVNGTFELWDLNYKLLPSISI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01171 244 PANTHER CARBONIC ANHYDRASE 189 236 IPR001765 GO:0004089|GO:0008270
Vian10g01171 244 Gene3D Carbonic anhydrase 188 244 IPR036874 GO:0004089|GO:0008270
Vian10g01171 244 Gene3D Carbonic anhydrase 66 187 IPR036874 GO:0004089|GO:0008270
Vian10g01171 244 CDD beta_CA_cladeB 77 232 IPR045066 GO:0004089|GO:0008270
Vian10g01171 244 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 153 173 IPR015892 GO:0004089|GO:0008270|GO:0015976
Vian10g01171 244 Pfam Carbonic anhydrase 105 182 IPR001765 GO:0004089|GO:0008270
Vian10g01171 244 SMART Pro_CA_2 97 233 IPR001765 GO:0004089|GO:0008270
Vian10g01171 244 SUPERFAMILY beta-carbonic anhydrase, cab 72 240 IPR036874 GO:0004089|GO:0008270
Vian10g01171 244 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 109 116 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01171 Vian-Chr10 19244326 19254111 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01171 K01673 - gmx:100803945 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01171 10 19244326 19254111 Vian10g01171 10 19244326 19254111 ECH