Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01069 ATGAGCATGACCGGTTCTTCAGCTTACTGTGTGGCACACGCCTTCCCTCCCTTCTTCCGCCTCTCCAACAAAACTATGTTCCTCCTCTCCACGCCGCCAACCACATTCTTACCTACGCCTACAACTCCTAGGGTTCCGCTTCTCTCTTCAACCGCTTCCTCCTCCTCCACCTCCTCCTCTTCATCCTCCTCCATCTCTCTGCGATCTTCCACTGCGCCCTCGCCTTCCTGCTCCTCCGTCACTCCTAAAGACAACTCTCTCGTTTCCGCCAAACATTCTCACCCTAACATGTCCGCCTCCGTCTCTTCCCGGACCTTTCTCAACGCTCGGAGCGAACAAGACGTTTTTGCCGGAATCAAGAAAGAAGTAGAAGCTGGATCTCTGCCTGCCAATGTTGCTGCAGGAATGCAAGAAGTGTACAATAACTATAAAAATGCAGTTATCCAAAGTGGAGATCCCAAGGCAAATGAGATTGTACTGTCAAATATGATTGCTTTATTAGATCGAGTATTTTTGGATGTGACGGATCCTTTTGTTTTTCAACCACACCACAAGGCAAAGAGAGAGCCTTTTGACTACTACGTGTTTGGGCAGAATTACATCCGTCCTTTAGTTGATTTCAAAAATTCTTATGTTGGCAACATGCCCCTTTTCATTGAAATGGAAGAGAAACTTAAGCAGGGGCACAACATCATCTTGATGTCAAATCATCAAACTGAAGCTGATCCAGCCGTCATTGCATTGCTTCTTGAAGCACGACTCCCATATATAGCTGAAAACCTGACCTATGTTGCAGGAGATAGAGTTATAACTGATCCTCTGTCCAAACCATTCAGTATTGGCAGGAATCTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCAGCACTTGTAGAGATGAAAAGAACTGCAAACATACGAGCTCTGAAGGAAATGGCTATGCTTTTAAGGAATGGTTCACAGATAGTCTGGATTGCCCCTAGTGGTGGTAGGGATCGCCCAGAAGCCCAAACCAGAGAATGGGTGCCGGCACCCTTTGATATTTCTTCGGTAGATAATATGCGAAGACTTGTTGAACATTCAGGTCCACCAGGTCATGTATATCCTTTGGCGATATTATGCCATGATATAATGCCCCCTCCACTGAAGGTCGAGAAAGAAATTGGGGAGAAAAGAATTATATCCTTTCATGGGGCTGGCATATCAGTGGCTCCAGCTATAAGCTTTTCTCAAGCCACTGCTACTTGTGAAAATCCTGAAAAGGCTAAGGACGTTTTCACAAAAGCCCTGTACGATTCTGTGACTGAGCAATATAATGTGCTGAAATCTGCTATACATGGAAAAAAAGGATTTGAAGCATCAACTCCTGTAGTTTCTTTGTCACAGCCATGGAAGTAG 1404 0.4501 MSMTGSSAYCVAHAFPPFFRLSNKTMFLLSTPPTTFLPTPTTPRVPLLSSTASSSSTSSSSSSSISLRSSTAPSPSCSSVTPKDNSLVSAKHSHPNMSASVSSRTFLNARSEQDVFAGIKKEVEAGSLPANVAAGMQEVYNNYKNAVIQSGDPKANEIVLSNMIALLDRVFLDVTDPFVFQPHHKAKREPFDYYVFGQNYIRPLVDFKNSYVGNMPLFIEMEEKLKQGHNIILMSNHQTEADPAVIALLLEARLPYIAENLTYVAGDRVITDPLSKPFSIGRNLICVYSKKHMLDDPALVEMKRTANIRALKEMAMLLRNGSQIVWIAPSGGRDRPEAQTREWVPAPFDISSVDNMRRLVEHSGPPGHVYPLAILCHDIMPPPLKVEKEIGEKRIISFHGAGISVAPAISFSQATATCENPEKAKDVFTKALYDSVTEQYNVLKSAIHGKKGFEASTPVVSLSQPWK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01069 467 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 43 467 IPR016222 GO:0004366|GO:0006650
Vian10g01069 467 SMART plsc_2 231 377 IPR002123 GO:0016746
Vian10g01069 467 MobiDBLite consensus disorder prediction 38 104 - -
Vian10g01069 467 PIRSF G3POAT 3 467 IPR016222 GO:0004366|GO:0006650
Vian10g01069 467 Pfam Acyltransferase 219 374 IPR002123 GO:0016746
Vian10g01069 467 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 103 466 - -
Vian10g01069 467 Gene3D - 177 458 - -
Vian10g01069 467 Gene3D - 101 176 IPR038114 -
Vian10g01069 467 Pfam Glycerol-3-phosphate acyltransferase N-terminal 103 178 IPR023083 GO:0004366
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01069 103 466 Acyl Lipid Metabolism Gene Families AT1G32200 68.956 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01069 K00630 - gmx:100789434 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01069 10 12179123 12190670 Vian10g01069 10 12179123 12190670 ECH