Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01035 ATGAATCGCAACCACGATCCCAATCCGTTTGACGAGGAAGAAGTGAATCCTTTCTCGAATCGTGCACGTAGTCCACCAGTAGCATCTGAACCACTGGGTTATGGTCAAAGACATGATGCTACAGTTGATATTCCTTTGGATACTACAAATGACTCGAAGAAAAAAGGTCAGGAGCTAGCAGCTTGGGAAGCAGATTTAAAACGGAGAGAGAAGGAAATAAAAAAAAGAGAAGAGGCTGTTGCTAGAGCTGGTGTTCCTGTTGATGATAAGAATTGGCCTCCATTGTTCCCAATCATTCACCATGATATTGCAAATGAGATACCGGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTCTGCCTAGTTTTTAATGTAGTTGCTGTAATTGTCTGTTGGATCAGAGGCGGTGGTGTTAAAATTTTTTTCCTTGCGGTGATATATGCTCTAATGGGTGTTCCCCTTTCATATGTTCTTTGGTACAGGCCTCTCTATCGTGCTATGAGGACGGATAGTGCACTGAAGTTTGGTTGGTTTTTCATGTTCTACTTGCTTCATATTGCATTTTGCATTTTTGCTGCAATCGCCCCTCCAGTTGTTTTTCATGGGAAATCATTGACGGGCATCCTTGCTGCAATTGATGTCTTCTCAGACCATCTATTGGTTGGGATTTTCTATTTGATTGGATTCGGGATGTTTTGCTTGGAGGCTCTTCTAAGCTTATGGGTACTCCAGAAAATATACATGTATTTCCGAGGGCATAAGTGA 789 0.4208 MNRNHDPNPFDEEEVNPFSNRARSPPVASEPLGYGQRHDATVDIPLDTTNDSKKKGQELAAWEADLKRREKEIKKREEAVARAGVPVDDKNWPPLFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALMGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHLLVGIFYLIGFGMFCLEALLSLWVLQKIYMYFRGHK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01035 262 MobiDBLite consensus disorder prediction 1 18 - -
Vian10g01035 262 Pfam SCAMP family 90 260 IPR007273 GO:0015031|GO:0016020
Vian10g01035 262 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 5 261 IPR007273 GO:0015031|GO:0016020
Vian10g01035 262 Coils Coil 59 79 - -
Vian10g01035 262 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01035 Vian-Chr10 11438888 11444053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01035 1 262 Miscellaneous Gene Families AT1G32050 76.515 9.13e-155 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01035 K19995 - gmx:100806586 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01035 10 11438888 11444053 Vian10g01035 10 11438888 11444053 ECH