Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01018 ATGTCGTCTAAGGTTGTGTACGAAGGGTGGATGGTGCGGTACGGCCGGCGGAAGATCGGGAGATCGTTCATTCACATGAGGTACTTCGTGTTGGAGTCGCGGCTGCTCGCCTATTACAAGAGGAAACCGCAGGATAATCAGGTCCCAATTAAAACACTGCTAATTGACGGCAACTGCAGAGTGGAGGATAGAGGCTTGAAGACTCATCATGGACATATGGTTTATGTTTTGTCGGTTTACAACAAGAAAGAAAAGAACCATCGAATTATGATGGCAGCATTTAACATCCAAGAGGCCCTAATTTGGAAGGAAAAAATAGAGTATGTTATTGATCAGCACCAGGGAGCTCAACCATCAAATGGCAACAAATATATTTCTTTTGAGTACAAATCTGGGATGGACAATGGAAAGACAGCTTCTTCCTCAGATCGTGAAAGCCAGTTCAGTGCTCAGGAGGATGAAGATGATACTCATCCTAATTTGTTAAGAAGGACAACAATTGGAAATGGCCCTCCTGAATCAGTTTTTGACTGGACACGGGAAATAGACTCGGATTTGTCAAATCAGAATATCAACAACCAAGCATTCTCAAGAAAACATTGGCGTCTTTTACAATGTCAAGATGGACTTCGTATTTTTGAAGAACTCGTTGAAGTTGATTACCTTCCAAGGAGCTGCAGTAGAGCTATGAAGGCAGTAGGTGTTGTGGAGGCGACTTGTGAAGAAATTTTTGAACTTGTGATGAGCATGGATGGGACACGGTTTGAATGGGATTGCAGTTTCCTACATGGTAGTTTAGTTGAGGAGGTGGATGGGCATACAGCAGTTCTTTATCATCGACTTCAGCTAGATTGGTTTCCAATGTTTGTGTGGCCCCGTGATCTTTGTTATGTACGATATTGGCGCCGAAATGATGATGGAAGTTATGTTGTTTTATTTCGTTCTAGGGAGCATGAAAACTGCAGTCCACAGCCAGGGTGTGTTCGAGCACATATTGAGAGTGGAGGATTTAATATTTCCCCCTTAAAACCTCGAAATGGAAGGCCAAGGACACAAGTCCAGCATCTTATGCAGATTGATTTGAAGGGATGGGGTGTGGGTTACCTGTCATCTTTTCAGCAGTATTGTGTCCGTCAAATGTTAAATAGTGTAGCTGGTTTACGTGAATGGTTTGCCCAATCAGATGAAAGAAACGCTCATCCAAGAATTCCTGTCATGGTTAACATGTCCTCAACATCTGTTTCTTCAAAGAAGAATCAGAAGCCAAATGATTTTTCTGTCAATCCTTCTTCTCTTGATCAAATGAATTCTGCAAGCAGAAACTCTGCCTTGATAGATGAATATTCTGATGATGAAGAAGATTTTCAAATAGCAGAATCTGAACAAGAGGCGTACCAAATTGGTCTTGAGAATGATGTGAAAAGAACAGCTTTGGAAGAAGAACCTGCAAATGAAATCGACTTATCTTCCTTTTCGGGAAATTTGCGCCGGGATGACCGAGATAATGCTCGGGACTGCTGGAAAATTTCTGATGGAAATAACTTTAGAGTCAGAAGCAAGCATTTTTGTTATGACAAGTCGAAGGTTCCTGCTGGCAAGCATATGCTGGATCTTGTTGCTGTAGATTGGTTTAAGGACTCAAAAAGGATGGACCATGTGGCTAGGCGTCATGGTTGTGCAGCCCAAGTAGCTTCAGAAAAAGGATTTTTCTCCATTGTCATTAATCTTCAAGTGCCTGCATCAACACACTATAGTATGGTTTTTTATTTTGTGACAAAGGAGTTAGTTTCTGGATCCCTGTTGCATCGCTTTGTTGATGGTGATGATGAGTTTCGAAACAGCAGGTTTAAGCTTATACCATCAGTCCCTAAGGGTTCATGGATTGTACGCCAGAGTGTTGGGAGTACTCCTTGTTTGCTGGGAAAGGCAGTTGATTGCAACTACATTCGTGGTCCCAAGTATTTAGAAATTGATGTTGATATTGGTTCCTCTACTGTTGCCAATGGAGTTTTGGGGCTGGTTATTGGTGTGATTACAACATTGGTTGTAGATATGGCTTTTCTTGTACAGGCAAATACTCCCGATGAGTTGCCCGAGAGGCTTATTGGAGCTGTTCGTATTTCTCACTTAGAGCTTAAATCTGCCATCGTCCCAAAACTGGAACAGGATGTATCATGA 2178 0.4215 MSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKRKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKNHRIMMAAFNIQEALIWKEKIEYVIDQHQGAQPSNGNKYISFEYKSGMDNGKTASSSDRESQFSAQEDEDDTHPNLLRRTTIGNGPPESVFDWTREIDSDLSNQNINNQAFSRKHWRLLQCQDGLRIFEELVEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGTRFEWDCSFLHGSLVEEVDGHTAVLYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHENCSPQPGCVRAHIESGGFNISPLKPRNGRPRTQVQHLMQIDLKGWGVGYLSSFQQYCVRQMLNSVAGLREWFAQSDERNAHPRIPVMVNMSSTSVSSKKNQKPNDFSVNPSSLDQMNSASRNSALIDEYSDDEEDFQIAESEQEAYQIGLENDVKRTALEEEPANEIDLSSFSGNLRRDDRDNARDCWKISDGNNFRVRSKHFCYDKSKVPAGKHMLDLVAVDWFKDSKRMDHVARRHGCAAQVASEKGFFSIVINLQVPASTHYSMVFYFVTKELVSGSLLHRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVVDMAFLVQANTPDELPERLIGAVRISHLELKSAIVPKLEQDVS 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01018 725 MobiDBLite consensus disorder prediction 135 174 - -
Vian10g01018 725 SMART PH_update 5 113 IPR001849 -
Vian10g01018 725 MobiDBLite consensus disorder prediction 410 438 - -
Vian10g01018 725 SUPERFAMILY PH domain-like 2 120 - -
Vian10g01018 725 SUPERFAMILY Bet v1-like 185 366 - -
Vian10g01018 725 SMART START_1 181 393 IPR002913 GO:0008289
Vian10g01018 725 Pfam START domain 227 374 IPR002913 GO:0008289
Vian10g01018 725 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 507 710 IPR009769 -
Vian10g01018 725 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 21 721 IPR045096 -
Vian10g01018 725 Gene3D - 201 403 IPR023393 -
Vian10g01018 725 Gene3D - 1 120 IPR011993 -
Vian10g01018 725 ProSiteProfiles PH domain profile. 4 111 IPR001849 -
Vian10g01018 725 ProSiteProfiles START domain profile. 201 383 IPR002913 GO:0008289
Vian10g01018 725 MobiDBLite consensus disorder prediction 147 161 - -
Vian10g01018 725 CDD PH 7 106 - -
Vian10g01018 725 CDD START 193 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01018 Vian-Chr10 11186070 11199640 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01018 - - gmx:100806401 1425.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01018 10 11186070 11199640 Vian10g01018 10 11186070 11199640 ECH