Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00994 ATGGGTAATCCACGGAGATCGAAGACGGCGGACGACCTTCATTCGGCGGCGAGGTCTGGGGATCTCATCGCCGTTCAGTCAATTTTGGCTTCAAATCCTTTGGCCGTTAATTCCAGAGATAAGCATTCCAGAACACCTCTACATTTAGCAGCATTTTCTGGGCAAGCAGAGGTAGTCACTTATCTCTGCAAGCACAAGGCTGATGCTGGTGCTTCTGCTATGGATGACATGGCTGCAATACACTTTGCTTCACAGAAGGGACATTTAGAAGTTGTTCGAGCTCTACTTTCAGCTGGGGCCTCTCTCAAAGCATCTACCCGCAAAGGCATGACTTCATTACACTATGCTGTTCAAGGTTCCCATCTGGAGCTCGTCAAGTATTTGGCCAAGAAAGGAGCAAACCTTGCTGCCCAGACAAAGGCAGGAAAGACCCCTTTGGATCTTGCTAACAATGGAGAAATCCGATCCTTTCTGGAGGAATTTGAGAAGTCAGCAAAGAATGGAGAATTGGGAAAGAAAGATAAAGATAAAGCTGAAGAATTTGATCCCAACACATCTGAATTGGAATTGGAATCGGAAGGTGATTTGAATGCCGAGCCTCCTAATGCTGCTCTTGATGAAGAAAAAAATGCAAGAGAAAAGAGAAAGGGTAATGAAGACGACGCAAGAGTAGAGTCGTCACAACCAAAAAAGGCGAGAGTTAAGTTAAGCCATCTCCAAAGTTCAGATGATACCCAAGAAGAAGAGAACATGTAG 756 0.4524 MGNPRRSKTADDLHSAARSGDLIAVQSILASNPLAVNSRDKHSRTPLHLAAFSGQAEVVTYLCKHKADAGASAMDDMAAIHFASQKGHLEVVRALLSAGASLKASTRKGMTSLHYAVQGSHLELVKYLAKKGANLAAQTKAGKTPLDLANNGEIRSFLEEFEKSAKNGELGKKDKDKAEEFDPNTSELELESEGDLNAEPPNAALDEEKNAREKRKGNEDDARVESSQPKKARVKLSHLQSSDDTQEEENM 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00994 251 ProSiteProfiles Ankyrin repeat region circular profile. 108 135 - -
Vian10g00994 251 SUPERFAMILY Ankyrin repeat 13 159 IPR036770 -
Vian10g00994 251 ProSiteProfiles Ankyrin repeat region circular profile. 75 104 - -
Vian10g00994 251 MobiDBLite consensus disorder prediction 205 245 - -
Vian10g00994 251 ProSiteProfiles Ankyrin repeat region circular profile. 42 68 - -
Vian10g00994 251 Pfam Ankyrin repeats (3 copies) 13 70 IPR002110 GO:0005515
Vian10g00994 251 Pfam Ankyrin repeats (3 copies) 80 158 IPR002110 GO:0005515
Vian10g00994 251 Gene3D - 6 182 IPR036770 -
Vian10g00994 251 PRINTS Ankyrin repeat signature 43 58 IPR002110 GO:0005515
Vian10g00994 251 PRINTS Ankyrin repeat signature 91 105 IPR002110 GO:0005515
Vian10g00994 251 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Vian10g00994 251 SMART ANK_2a 8 38 IPR002110 GO:0005515
Vian10g00994 251 SMART ANK_2a 42 71 IPR002110 GO:0005515
Vian10g00994 251 SMART ANK_2a 75 104 IPR002110 GO:0005515
Vian10g00994 251 SMART ANK_2a 108 137 IPR002110 GO:0005515
Vian10g00994 251 MobiDBLite consensus disorder prediction 168 251 - -
Vian10g00994 251 MobiDBLite consensus disorder prediction 168 184 - -
Vian10g00994 251 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Vian10g00994 251 PANTHER ANKYRIN REPEAT PROTEIN 10 198 - -
Vian10g00994 251 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00994 13 175 Miscellaneous Gene Families AT5G02620 30.556 1.87e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00994 - - gmx:100812821 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00994 10 10801716 10803486 Vian10g00994 10 10801716 10803486 ECH