Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00991 ATGGTCGACGCTGGATTCCACGATGTTGCCGTTCTTTTCGATCGGAAATTAAGGATAGCGGCTGCTAATAGACAACAAGCTTCCATTGAAATGGGGGAGTTCTCCCATGACGAGTATGTAGCTGTCAGTGAATCAACTTCCACCAGGGCAAATCACTCAAGTAAAGTTTCACTTCTTCCTCTTGTCTTTCTCATCTTCTATGAGGTTTCAGGGGGGCCTTTTGGGGTTGAGGATACTGTGCAGGCAGCTGGTCCTCTGTTAGCCCTCCTTGGGTTCTTGCTTTTCCCATTAATATGGAGTGTTCCTGAAGCTTTGATCACGGCGGAGATGGGTACCATGTTCCCTGAAAACGGTGGTTATGTGGTTTGGGTTTCCTCTGCTCTGGGGCCCTATTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTGAGTGGGGTGATAGACAATGCTTTATACCCAGTTCTATTTCTTGACTATCTGAAGTCAGCAGTCCCAGCTGTAGGTGGTGGATTGCCTAGAGTTGCTGCAACATGGGCTCTGACTATTGTGCTCACTTACTTGAACTATAGGGGTATGGTCATTGTGGGATGGGTTGCTGTTTGTTTAGGGGTTTTCTCACTCCTCCCTTTTGTGGTTATGGGATTCTTGTCAATTCCCGATCTACAGCCTTCAAGATGGGCTGTGACAAACCTCAATGATGTTGATTGGAATTTGTATCTGAACACTCTATTTTGGAATCTTAACTATTGGGATTCCATAAGTACTCTTGCTGGAGAAGTGGAAAATCCAAAGAAAACTCTTCCAAGGGCTTTGTTTTACGCTGTGATTCTAGTAGTTCTAGGGTACTTCTTTCCTCTCCTAATAGGTACCGGTGCTGTTCCCCTCAACCGGGATCTTTGGTCGGATGGCTACTTCTCAGATGTTGCTATGATCATAGGAGGGGCATGGTTGAGATGGTGGCTTCAGGCTGCCGCCGCCATGTCAAATATGGGAATGTTTGTTGCTGAAATGAGCAGTGATTCTTTCCAGCTACTAGGGATGGCTGAGAGAGGAATGTTGCCTGAGTTCTTCACCAAGAGGTCTCGCCACGGAACACCTCTAATAGGAATACTCTTTTCAGCAACAGGTGTGATTATACTGTCATGGATGAGCTTTCAAGAAATTGTAGCTGCTGAAAATTTCTTGTACTGTTTTGGGATGATTCTGGAGTTTATTGCATTCATTCTGTTAAGGATCAAACACCCCAATGCATCTCGCCCTTACAAGATAGCAGGGGGAACAGCAGGAGCAATTTTGCTCTGTATCCCTCCCACTATACTGATTGGTGTTGTGTTGTTTTTCTCCTCCCTTAAAGTAATGTTTGTAAGCCTCATCGCTATTGCAATAGGCCTTGTGTTGCAGCCTTGCCTCAAATATGTGGAGAAAAAGAGATGGATGAAGTTTTCCCACAGTTCTGAGCTCCCTGATCTTGGCAATCTGGATGAGAATCGCTCTTTGGTGTATTGA 1503 0.4544 MVDAGFHDVAVLFDRKLRIAAANRQQASIEMGEFSHDEYVAVSESTSTRANHSSKVSLLPLVFLIFYEVSGGPFGVEDTVQAAGPLLALLGFLLFPLIWSVPEALITAEMGTMFPENGGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAVPAVGGGLPRVAATWALTIVLTYLNYRGMVIVGWVAVCLGVFSLLPFVVMGFLSIPDLQPSRWAVTNLNDVDWNLYLNTLFWNLNYWDSISTLAGEVENPKKTLPRALFYAVILVVLGYFFPLLIGTGAVPLNRDLWSDGYFSDVAMIIGGAWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFTKRSRHGTPLIGILFSATGVIILSWMSFQEIVAAENFLYCFGMILEFIAFILLRIKHPNASRPYKIAGGTAGAILLCIPPTILIGVVLFFSSLKVMFVSLIAIAIGLVLQPCLKYVEKKRWMKFSHSSELPDLGNLDENRSLVY 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00991 500 Gene3D Amino acid/polyamine transporter I 54 486 - -
Vian10g00991 500 PANTHER POLYAMINE TRANSPORTER PUT1 44 489 IPR044566 GO:0022857
Vian10g00991 500 FunFam Amino acid permease, putative 52 481 - -
Vian10g00991 500 PIRSF AA_transporter 36 497 - -
Vian10g00991 500 Pfam Amino acid permease 61 447 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00991 Vian-Chr10 10784782 10787002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00991 42 489 Organic Solute Cotransporters AT1G31830 75.670 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00991 - - gmx:100813355 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00991 10 10784782 10787002 Vian10g00991 10 10784782 10787002 ECH