Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00988 ATGGTTATGCAGGAGGACTTTGAGCTGTATGCTACCAAAGCAAAAACATTGCCAGCAAATCAAACAAATGAAAACTTGCTTATCATTTATGGATTGTACAAGCAGGCCACTGTTGGACCTGTTAACACTGCCCGTCCTGGAATGTTCAACATGAAGGACAGAGCTAAATGGGATGCATGGAAGGCTGTTGAAGGGAAATCCAAGGACGAAGCAATGAATGATTACATCACTAAGGTGAAACAGCTGCTGGAAGAAGCTGGCTTGCCTGCTTGA 273 0.4396 MVMQEDFELYATKAKTLPANQTNENLLIIYGLYKQATVGPVNTARPGMFNMKDRAKWDAWKAVEGKSKDEAMNDYITKVKQLLEEAGLPA 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00988 90 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 88 IPR000582 GO:0000062
Vian10g00988 90 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 4 84 - -
Vian10g00988 90 SUPERFAMILY Acyl-CoA binding protein 3 85 IPR035984 GO:0000062
Vian10g00988 90 Gene3D - 1 88 IPR014352 -
Vian10g00988 90 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Vian10g00988 90 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
Vian10g00988 90 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Vian10g00988 90 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Vian10g00988 90 FunFam Acyl-CoA-binding domain-containing protein 5 2 90 - -
Vian10g00988 90 Pfam Acyl CoA binding protein 4 79 IPR000582 GO:0000062
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00988 1 90 Acyl Lipid Metabolism Gene Families AT1G31812 68.889 1.63e-41 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00988 K08762 - gmx:100500327 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00988 10 10767180 10767654 Vian10g00988 10 10767180 10767654 ECH