Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00981 ATGGATTTTCTGGAATACTATTCATGTACTGCATATCTGTACAAAAGCTTTCGTGTGTATGAAGTCAATAGTATAAAAGGTTCGTGTCAAACTATCATTTCCTTTTGGAGGAGAGTTCCTTTACATGTAAGGAAAGTTAGTTATATTGAACATGTTGGTGATGTTGTGCATTTTAGAGGTTTTGATAATGTTTTAGTTGATTTTGATGGTAGAAGTTGTGGTTCACTTGGATTAAGGCACTGGGCAAATAGAATTTCTAGGGATGTAATGAAAATCTTAATATGCGAAGTCAATGACATGATTAAGATGATTGGTTTGGTTTGCTTTGTCAAGTTTTGGAGTCACACAATTAGAAAAAAAAAAAATTTAGTACATAATGGAGGTGTTAGTAATCCTCAAATGTCGTTATGTGGGGTCACGTCACACGTATTGTTGTTTGGAATCATGGCCATAGAGATTAAAAGAAAGGCTCCTCATGCTCATACTGTTTGTGAAATTGTCAAGGCACGTTGGGGGACTTCTGCACACGTTGTTTTCCTCTTTTTCTGCTTCTTGACGAATATAATTGTGACGGCTATGTTGCTCCTTGGTGGTTCTGCTGTTGTGAATGCATTAACAGGAGTGAACCTTTATGCCGCTAGCTTTCTAATACCACTTGGAGTAATTGTGTATACACTGGCGGGTGGACTGAAAGCCACATTCTTAGCAAGCTATATCCATTCTGTCATAGTGCACATTGTTTTGGTGATTTTTGTCTACCTTGTCTACACGGCTAGCAGTGAGCTTGGAAGCCCTTCTGTGGTGTACAATCGCCTACTAGAGGTTGCAAGCAAATCAAGGACATGTCAGGATCCTATATCACACAAAGGGCAATCTTGTGGTCCTGTTGGTGGGAATCACCAAGGTTCTTACCTAACAATGCTGAGTTCAGGTGGCTTGGTGTTTGGGATTATAAACATTGTTGGCAACTTTGGCACTGTGTTTGTTGACAATGGATACTGGGTGAGTGCCATCGCAGCAAGACCTTCATCAACACACAAAGGCTACTTGTTAGGAGGCTTGGTCTGGTTTGCTGTGCCATTTTCTTTGGCTACATCGTTGGGTTTAGGAGCTCTAGCCCTTGATTTACCAATAAATGAAAGTGAAGCAGGTCGTGGACTTGTTCCCCCTGCTACAGCGGTAGCCCTGATGGGGCAAGGAGGATCTATTCTTCTTCTTACCATGCTTTTTATGGCAGTGACTTCTGCTGGTTCATCAGAACTAATTGCAGTCTCATCATTATGCACATATGATATCTACAGAACTTACATAAATCCTCATGCAAGTGGAAAGCAAATCCTCAAGGTGTCAAGAGGTGTTGTTCTAGGCTTCGGGTGTTTGATGGGGTTGCTAGCAGTCATACTGAACATGGCTGGAGTTTCTTTAGGATGGATGTACCTTGCAATGGGAGTTCTGATTGGCTCAGCAGTTCTTCCTATTGCTTTTATGCTTCTATGGAGAAAAGCAAATGCAACAGGAGCCATTCTTGGAACAGTCACAGGTTGTGTTCTGGGAATTATCACATGGCTGTCTGTCACAAAAATACAATATGGCAGGGTAAACCTGGATACAACTGGAAGAAATGCACCAATGCTTGTTGGAAACCTTGTCTCTATACTAACTGGAGGAGTTGTTCATGCTATCTGCAGCATGTTGTGGCCTCAGAACTATGACTGGAGCACCACCAAACAAATCACAGTGGTGGAAAAGGAAAAGACTGATCTGCCAGCAGAAGAGTTTAAAGAAGAAAAGCTAATCAGAGCTAAAGCTTGGGTGGTGAAGTGGGGTATTGGTTTCACTGTTTTGATTGTCATACTTTGGCCTATTCTCTCCCTCCCAGCAGGTGAGTTCAGTAAGGGCTATTTCTATTTCTGGGCAGTGATTGCTATAGCATGGGGTAGTGTTGGGTCTGCTGTGATAATTGTTTTACCAATAATGGAGAGCTGGGAAACCATTAAAAGTGTGATTATGGGGATGTTTACAAATGACAGACTAATGGAAAAGGTGGAAGAGTTAAATTTGAAGTTGCAGACAATTATTCAAGCAATACCAGAAGCAGAGCGACTTTACTTGCTTGAGAAGGGAAAGGCCAAAAAGTTAGAAGAAACCTCGGAGCAACATTCTTCTTCACTTCCTGCATAA 2181 0.4149 MDFLEYYSCTAYLYKSFRVYEVNSIKGSCQTIISFWRRVPLHVRKVSYIEHVGDVVHFRGFDNVLVDFDGRSCGSLGLRHWANRISRDVMKILICEVNDMIKMIGLVCFVKFWSHTIRKKKNLVHNGGVSNPQMSLCGVTSHVLLFGIMAIEIKRKAPHAHTVCEIVKARWGTSAHVVFLFFCFLTNIIVTAMLLLGGSAVVNALTGVNLYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIVHIVLVIFVYLVYTASSELGSPSVVYNRLLEVASKSRTCQDPISHKGQSCGPVGGNHQGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDLPINESEAGRGLVPPATAVALMGQGGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPHASGKQILKVSRGVVLGFGCLMGLLAVILNMAGVSLGWMYLAMGVLIGSAVLPIAFMLLWRKANATGAILGTVTGCVLGIITWLSVTKIQYGRVNLDTTGRNAPMLVGNLVSILTGGVVHAICSMLWPQNYDWSTTKQITVVEKEKTDLPAEEFKEEKLIRAKAWVVKWGIGFTVLIVILWPILSLPAGEFSKGYFYFWAVIAIAWGSVGSAVIIVLPIMESWETIKSVIMGMFTNDRLMEKVEELNLKLQTIIQAIPEAERLYLLEKGKAKKLEETSEQHSSSLPA 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00981 726 Gene3D Sodium/glucose cotransporter 123 620 IPR038377 -
Vian10g00981 726 Pfam Sodium:solute symporter family 141 514 IPR001734 GO:0016020|GO:0022857|GO:0055085
Vian10g00981 726 PANTHER - 112 711 IPR031155 GO:0015204|GO:0016020|GO:0071918
Vian10g00981 726 ProSiteProfiles Sodium:solute symporter family profile. 143 528 IPR001734 GO:0016020|GO:0022857|GO:0055085
Vian10g00981 726 CDD SLC5sbd_DUR3 112 566 - -
Vian10g00981 726 Coils Coil 675 702 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00981 26 715 Organic Solute Cotransporters AT5G45380 68.489 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00981 K20989 - gmx:100784391 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00981 10 10681082 10689498 Vian10g00981 10 10681082 10689498 ECH