Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00980 ATGAGGATGATGATGATTCGCGGCGGCAGCAACCGAGTGGCCAACACTGTCATGTTGGTGGCGAAGGGTTTAAGCGGTGAAGTTGGTGGTGCAAGAGCGTTTTATGGCGGTGGTGTGAGGAGTGAGAGCACTTTGGTTTTACCGGAGAAGGAGAAGATGGAGAAGAAGGTTGGTGCGTCTGGCGGTGGTGAAAACAAAGATCAAAAAGGGACTGTGAGTTATTGGGGCGTTGAACCCTCTAAGATCACCAAACTAGATGGCACAGAGTGGAAGTGGAATTGCTTTAGGCCATGGGAGACATACAAAGCAGATGTTTCAATTGATCTGAACAAGCACCATGCACCCACCACATTTCTTGACAAAATGGCTCTTTGGACTGTCAAAACTCTCCGATACCCCACTGATCTATTTTTCCAGAGACGATATGGATGCCGAGCAATGATGCTAGAAACAGTGGCAGCAGTGCCTGGGATGGTAGCAGGCATGCTATTGCATTTGAAATCACTTAGAAGATTTGAGCAGAGTGGGGGTTGGATCAAAGCACTGCTAGAAGAAGCAGAAAATGAACGGATGCACCTAATGACGTTCATGGAAGTGGCAAAGCCAAAGTGGTACGAGCGTGCACTGGTCATAACTGTGCAAGGTGTTTTCTTCAATGCATACTTCTTGGGGTATATGATATCTCCTAAATTTGCACACCGCATGGTGGGTTACCTTGAGGAGGAGGCAATACACTCCTACACGGAGTTCCTCAAGGAATTGGACAAGGGCAACATACAGAATGTGCCAGCTCCAGCCATTGCCATCGACTACTGGCAGCTCCCACCAGACTCCACTTTAAGGGATGTTGTCACGGTTGTCAGAGCTGACGAGGCACACCACCGTGATGTCAACCACTTTGCTTCGGACATACACTACCAAGGGCGCGAGTTAAGAGAGATTGCTGCTCCAGTTGGTTATCACTAG 966 0.4855 MRMMMIRGGSNRVANTVMLVAKGLSGEVGGARAFYGGGVRSESTLVLPEKEKMEKKVGASGGGENKDQKGTVSYWGVEPSKITKLDGTEWKWNCFRPWETYKADVSIDLNKHHAPTTFLDKMALWTVKTLRYPTDLFFQRRYGCRAMMLETVAAVPGMVAGMLLHLKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGVFFNAYFLGYMISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIQNVPAPAIAIDYWQLPPDSTLRDVVTVVRADEAHHRDVNHFASDIHYQGRELREIAAPVGYH 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00980 321 FunFam Ubiquinol oxidase 74 318 - -
Vian10g00980 321 Pfam Alternative oxidase 111 301 IPR002680 GO:0009916
Vian10g00980 321 CDD AOX 138 305 IPR002680 GO:0009916
Vian10g00980 321 Gene3D Alternative oxidase 72 313 IPR038659 -
Vian10g00980 321 PANTHER ALTERNATIVE OXIDASE 48 321 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00980 Vian-Chr10 10678630 10680859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00980 32 321 Miscellaneous Gene Families AT3G22370 80.795 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00980 K17893 - gmx:547924 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00980 10 10678630 10680859 Vian10g00980 10 10678630 10680859 ECH