Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00979 ATGATCGAGGAAGCACTAGTACGGTGTAACTGTTCCAAAGTTAGTTCTCTTCCATCTCCGTCGGTCTCACTGTCTCCATTTCGCTATCGCAATCATCTTCACCGTCTTCTTCGGAATGCGCCATTTTCATCTTCTGTAACTGCTCACAGAAGAAAGAGGTTTTGTGAGAAGCTTGTGTCCAACATGGCTAACTATGAAGGACAGACGGTTACTAGTGGCAGCGATGTTAGATCAGGGAGTATGATTTTTGTGCCTATTTTGGAAGATGGAGTGTTCCGGTTTGATTGTTCCGTGAATGATCGAGGTGCAGCGTATCCCAGTATTTCTTTTGCGAATAGCAGGAATAGAGACACACCTATCTCGACTCAGAAGGTTCCTTTGTATATCCCTACGTTTGAGTGTCTTCTAGAGCAGCAGGTTGTCAAACTTGAGCTGCCTGTAGGTTCCTCTCTTTATGGAACTGGAGAAGCTAGTGGAGATCTAGAGAGGACGGGCAAAAGAGTTTTCACGTGGAACACAGATGCATGGGGTTATGGACCTGGAACTACATCCTTGTATCAATCCCATCCATGGGTGTTAGCGGTTCTTCCCAATGGTGAGGCACTTGGAATTCTTGCTGACACTACAAGGCGCTGTGAGATTGATCTGAGGAGAGAATCAACGATACAGTTTGTTGCTTCATCCTCATTTCCTGTCATTACATTCGGCCCATTTTCTTCACCCACTGAAGTGTTGATATCCCTATCAAAAGCAATTGGAACTGTATTTATGCCCCCAAAATGGTCATTAGGCTATCATCAATGCCGTTGGAGCTATTTATCTGACCAGAGAGTTCTGGAGGTTGCAAAAACATTCCGGAAAAAGTGTATACCTTGTGATGTGATATGGATGGATATTGATTACATGGATGGTTTTCGTTGTTTCACCTTTGACAAGGAGCGTTTTCGAGATCCTACATCTTTAGTGAAAGATCTCCATTATAGTGGTTTTAAAGCTATTTGGATGCTTGATCCTGGAATCAAGCATGAGGATGGTTATTTTGTATATGATAGTGGTTCTAAAAATGAAGTTTGGGTCCAAAAGGCAGATGGAACTCCTTATGTAGGGGAGGTGTGGCCTGGACCATGTGTCTTCCCTGACTATACACAGTCAAAAGTTCGTACATGGTGGGCAAATTTAGTTAAAGATTTCATTTCCAATGGTGTTGATGGTATATGGAATGATATGAATGAACCAGCTATCTTTAAGGTTGTTACAAAAACAATGCCTGAGAGCAATGTTCATAGAGGAGATGGTGAACTAGGGGGTTGTCAGAATCATTCGTTCTATCATAATGTGTATGGTCTACTGATGGCAAGATCAACTTATGAAGGCATGAAACTAGCCAATGAAAATAAGAGGCCTTTTGTTCTTACTAGAGCTGGATTTCTTGGCAGCCAAAGGTATGCTTCAACATGGACTGGAGATAATCTTTCTACCTGGGAGCATCTTCATATGAGTATCTCAATGGTACTTCAGCTGGGACTTAGTGGTCAGCCACTTTCAGGTCCTGATATTGGTGGATTTGCTGGAAATGCAACACCTAAGCTTTTCGGAAGGTGGATGGGTGTAGGTTCCATGTTTCCCTTTTGCCGAGGTCATTCTGAAGCTGCCACAGCTGACCATGAACCGTGGTCCTTTGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCACTGAAGAGGCGCTACCGTCTAATCCCTCTTATCTACACTCTTTTCTATTTTGCTCACACCAGGGGCACTCCAGTGGCAACCCCTATTTTCTTTGCCGATCCAAAAGATCCTAGCCTGAGAAAACTTGAAAATTCTTTTTTGCTGGGTCCAGTCTTAGTGTATGCAAGCACCTTACAAGGACAGGGGTTGGATAAGATGGAGATTACTTTGCCTAAGGGAATATGGTTGAGTTTTCATTTCAATGATGCACATCCGGATTTGCCAGCTTTATACTTAAAAGGTGGCTCAATTATTCCTGTGGGCCTCCCTCTTCAGCATGTTGGAGAAGCTAATCCCTCAGATGACTTGACCCTTCTTGTGGCTTTAGATGAATATGGGAAAGCTGAAGGTGTTCTGTTTGAGGATGACGGTGATGGATATGAATTCACAAAAGGGAATTATTTATTAACACACTATGTGGCTGAACTTAAATCATCGATAGTTACTCTGAGGGTACACAAAACTGAAGGATCATGGGAAAGACCCAAACGCCGCCTGCATATTCAGTTATTGCTGGGTGGGGGTGCAATGCTTGAAACATGGGGAAGTGATGGAGAAGTTCTGCAACTAATCTTGCCTTCAGAAGAGGAGGTGTTGAAGCTAGTATCTATTAGTGAGAAACAATACAAGGACCGTTTGGAAAATGCAACTGCAATTCCTGATGTAGAAGAGGTTTCTGGACCCAAAGGAACAGAGCTTTTAAAAACTCCCATTGAACTGAAAAATGGGGAGTGGGATCTTAAAGTTGTTCCCTGGATTGGGGGTAGAATCATCTCCATGACACACATTCCTTCTGGAACACAATGGCTCCATAGTAGGATTGAGATCAATGGTTATGAGGAGTACAGTGGTACGGAGTATCGTTCTGCTGGGTGTTCTGAGGAGTATTCTGTCCTTGATCGAGAACCTGGGCTGGTGGTGTTAGAGGGTGATATTGGTGGAGGATTGGTTCTTCAACGTCATATCTATGTTCCAAAGAATGTTGCCAACATCATCCAGATAGACTCTAGTATAATAGCCCGAAGTGTTGGAGCTGGTTCTGGAGGGTTCTCAAGGTTGGTGTGCTTACGAGTTCACCCAACGTTCATTCTTTTGCATCCGTCTGAATCTTTTGTTTCATTTACTTCAATGGATGGATCGGTGCATGAAGTCTTTCCTGATAGCGGGGAGCAATTCTTTGAAGGAAACCTCATTCCTAATGGTGAGTGGAAGCTCATTGATAAATGTCTTGGCTTGGCACTGGTCAACCGATTTAGTGTAACTGAGGTATTCAAGTGTCTCGTTCACTGGGATTGTGGCACTGTCAACCTGGAGCTTTGGTCTGAGAGTAGACCTGTTTCAAAGCAATCTCCTCTTCGAATTTCACATAAATACGAGGTTATAAGAATCCCATAA 3147 0.4337 MIEEALVRCNCSKVSSLPSPSVSLSPFRYRNHLHRLLRNAPFSSSVTAHRRKRFCEKLVSNMANYEGQTVTSGSDVRSGSMIFVPILEDGVFRFDCSVNDRGAAYPSISFANSRNRDTPISTQKVPLYIPTFECLLEQQVVKLELPVGSSLYGTGEASGDLERTGKRVFTWNTDAWGYGPGTTSLYQSHPWVLAVLPNGEALGILADTTRRCEIDLRRESTIQFVASSSFPVITFGPFSSPTEVLISLSKAIGTVFMPPKWSLGYHQCRWSYLSDQRVLEVAKTFRKKCIPCDVIWMDIDYMDGFRCFTFDKERFRDPTSLVKDLHYSGFKAIWMLDPGIKHEDGYFVYDSGSKNEVWVQKADGTPYVGEVWPGPCVFPDYTQSKVRTWWANLVKDFISNGVDGIWNDMNEPAIFKVVTKTMPESNVHRGDGELGGCQNHSFYHNVYGLLMARSTYEGMKLANENKRPFVLTRAGFLGSQRYASTWTGDNLSTWEHLHMSISMVLQLGLSGQPLSGPDIGGFAGNATPKLFGRWMGVGSMFPFCRGHSEAATADHEPWSFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTRGTPVATPIFFADPKDPSLRKLENSFLLGPVLVYASTLQGQGLDKMEITLPKGIWLSFHFNDAHPDLPALYLKGGSIIPVGLPLQHVGEANPSDDLTLLVALDEYGKAEGVLFEDDGDGYEFTKGNYLLTHYVAELKSSIVTLRVHKTEGSWERPKRRLHIQLLLGGGAMLETWGSDGEVLQLILPSEEEVLKLVSISEKQYKDRLENATAIPDVEEVSGPKGTELLKTPIELKNGEWDLKVVPWIGGRIISMTHIPSGTQWLHSRIEINGYEEYSGTEYRSAGCSEEYSVLDREPGLVVLEGDIGGGLVLQRHIYVPKNVANIIQIDSSIIARSVGAGSGGFSRLVCLRVHPTFILLHPSESFVSFTSMDGSVHEVFPDSGEQFFEGNLIPNGEWKLIDKCLGLALVNRFSVTEVFKCLVHWDCGTVNLELWSESRPVSKQSPLRISHKYEVIRIP 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00979 1048 SUPERFAMILY Galactose mutarotase-like 140 224 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vian10g00979 1048 CDD GH31_N 141 253 - -
Vian10g00979 1048 PANTHER ALPHA-GLUCOSIDASE 136 728 - -
Vian10g00979 1048 CDD GH31_glucosidase_II_MalA 253 593 - -
Vian10g00979 1048 Gene3D Glycosidases 242 596 - -
Vian10g00979 1048 SUPERFAMILY (Trans)glycosidases 250 593 IPR017853 -
Vian10g00979 1048 Pfam Domain of unknown function (DUF5110) 687 755 IPR033403 -
Vian10g00979 1048 ProSitePatterns Glycosyl hydrolases family 31 active site. 404 411 IPR030458 -
Vian10g00979 1048 SUPERFAMILY Glycosyl hydrolase domain 595 655 - -
Vian10g00979 1048 Pfam Galactose mutarotase-like 150 215 IPR025887 -
Vian10g00979 1048 Gene3D - 598 667 IPR013780 -
Vian10g00979 1048 Gene3D glycosyl hydrolase (family 31) 101 235 - -
Vian10g00979 1048 Pfam Glycosyl hydrolases family 31 240 669 IPR000322 GO:0004553|GO:0005975
Vian10g00979 1048 Gene3D - 668 787 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00979 Vian-Chr10 10662324 10677501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00979 75 1048 Glycoside Hydrolase AT3G23640 71.939 0.0 1528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00979 - - gmx:100809690 1920.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00979 10 10662324 10677501 Vian10g00979 10 10662324 10677501 ECH