Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00965 ATGCTGAAAGCATTGGGTGCACGTGCAGTGCTATGCTCGAACTCTTCTTCCACTAGTGTTGTAAGTAAGATGAGTTCTGCGCCGGCATCTCGCAAGTTCGTTTCCGTGGAAGGCTCAGACATACATTCCAGAAGTAAACCTGATGGCTTCAGATTCAGCCTTGTTTCGTATAACATATTGGCGCAGGTTTATGTGAAGAGCTCGCTGTTCCCGCATTCTCCATCTTCGTCTCTCAAATGGAAACCTCGTTCAAACGCAATTTTGGAAGTTCTCAAGGACTTGAGAGCTGATTTTTTCTGCCTGCAGGAAGTTGATGAATTTGAAAGCTTTTACAAAGGAAACATGCAGAATTTAGGATATTCTTCGATTTATATGAAGAGAAGTGGTCAGAAGCGTGATGGGTGTGGCTTATTTTACAAGCATGAATGTGCAGAGTTGCTCTTAGAGGAAAAAATTGAATACAATGATCTTGTAAAGTCCATTCCAGATGGGAACTCTTCAAACGATGATGATCACACCAATATTCAGACGGTCCATGCTGATAAACAAAAGGACGTGGCACCCAAAAATGAAGATCGTGGAGATCCCAATGACCCCCGTGTGAGACTTAAGCGTGATTGTGTTGGAATAATGGCTGCATTCAAATTCAAAGATCCCTCTCGTCATATTGTTATTGTGGCCAACACACATCTTTATTGGGATCCTGAATGGGCTGATGTCAAGCTTGCACAAGCTAAATATCTTCTATCCCGCCTGGCAAAATTTAAAACACTGGTCTCAGATAGATATGAATGCATACCTGAAGTCATTGTGGCTGGTGACTTCAATTCTCAGCCAGGAGACACGGTCTACCAGTACCTTGTATCTGGAAATCCTTCATCAAATCTGGTGCTGAACTGTTTAGACGAGTCGCCTCCTATTCCCTTATGTAGTGTCTATGCTTCTACAAGAGGAGAGCCACCATTTACAAACTACACACCTGGCTTCACTGGAACACTCGACTATATTTTATTTTCCCCTTCTGATCACATTAAACCAATTAGTTTTCTTGATCTTCCAGACTCTGATGCAGCCGATATTGTTGGTGGACTGCCAAACTTTAGTTATCCTAGTGATCATCTACCAATTGGTGCTGAGTTCGAAATCATCAAGGAGTAA 1158 0.424 MLKALGARAVLCSNSSSTSVVSKMSSAPASRKFVSVEGSDIHSRSKPDGFRFSLVSYNILAQVYVKSSLFPHSPSSSLKWKPRSNAILEVLKDLRADFFCLQEVDEFESFYKGNMQNLGYSSIYMKRSGQKRDGCGLFYKHECAELLLEEKIEYNDLVKSIPDGNSSNDDDHTNIQTVHADKQKDVAPKNEDRGDPNDPRVRLKRDCVGIMAAFKFKDPSRHIVIVANTHLYWDPEWADVKLAQAKYLLSRLAKFKTLVSDRYECIPEVIVAGDFNSQPGDTVYQYLVSGNPSSNLVLNCLDESPPIPLCSVYASTRGEPPFTNYTPGFTGTLDYILFSPSDHIKPISFLDLPDSDAADIVGGLPNFSYPSDHLPIGAEFEIIKE 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00965 385 Pfam Endonuclease/Exonuclease/phosphatase family 55 343 IPR005135 GO:0003824
Vian10g00965 385 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 20 382 - -
Vian10g00965 385 MobiDBLite consensus disorder prediction 178 200 - -
Vian10g00965 385 Gene3D Endonuclease/exonuclease/phosphatase 19 385 IPR036691 -
Vian10g00965 385 FunFam Carbon catabolite repressor protein 4 homolog 4 30 385 - -
Vian10g00965 385 SUPERFAMILY DNase I-like 51 382 IPR036691 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00965 K12603 - gmx:100775932 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00965 10 10438876 10442695 Vian10g00965 10 10438876 10442695 ECH