Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00951 ATGCCGTCGTCCCACCGCGACCATGGCCAGGCGGCCGAGTACCAGAACCAGAACCAGCACCAGAACCAGCACCAGCACCAGCACCAGCACCAGCACAGAAGAAAATTGGTAAACACTCATCATAGCGGCAACACACACCCTTTGATCTGGCTGGCGGCAATTCTCTGCACAATCATAGCCATAGGTGTTGTAGTAGCAGGCATAGTGGTTTTCGTGGGTTACATGGTGATCCACCCCAGAATCCCTGTGATAAGCGTCACCAAGGCTCACCTTGACCTTCTAAGCAACGACTACGCGGGTCTTCTCCAAACACAACTCACCATCATCGTGGTGGCCCAGAACGGGAACGCCAGGGCCCATTCAACCTTCTCTGACATAAACTTCAACCTCAGCTACCAGGGCCAGCCGATAGCAAGGATGATTGCCGAACCCTTTGATGTTCCCAAGAACAGCTCCAAGACTCTGAACTACGTTGTTCGGTCTGCTTCCATCCCTTTGACACCGGACCAGATGGAGGAAGTGGATGAGTCATGGAAGCGTGACGTGATAGGGTTTGACTTGAAGGGAAGCGCCAGAACAAGGTGGAGAGTAGGAGCCTTAGGTTCGGTTAAGTTCTGGAGCAACTTGGAGTGTGAACTCAAGTTTCGCCCTTCCAATGGGAGTTACATTAAGCATTCACGCTGCACCTCTGAGTCCAAATGA 702 0.5242 MPSSHRDHGQAAEYQNQNQHQNQHQHQHQHQHRRKLVNTHHSGNTHPLIWLAAILCTIIAIGVVVAGIVVFVGYMVIHPRIPVISVTKAHLDLLSNDYAGLLQTQLTIIVVAQNGNARAHSTFSDINFNLSYQGQPIARMIAEPFDVPKNSSKTLNYVVRSASIPLTPDQMEEVDESWKRDVIGFDLKGSARTRWRVGALGSVKFWSNLECELKFRPSNGSYIKHSRCTSESK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00951 233 MobiDBLite consensus disorder prediction 1 36 - -
Vian10g00951 233 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 5 228 - -
Vian10g00951 233 Gene3D - 65 214 - -
Vian10g00951 233 Pfam Late embryogenesis abundant protein 112 211 IPR004864 -
Vian10g00951 233 MobiDBLite consensus disorder prediction 9 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00951 Vian-Chr10 10026007 10026708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00951 23 213 EF-hand Containing Proteins AT5G21130 19.271 6.25e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00951 - - gmx:100819030 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00951 10 10026007 10026708 Vian10g00951 10 10026007 10026708 ECH