Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00949 ATGGAGGACAGAACCATAGGAAGAAGTGGAAGCTCTAGAAAGGGTAGCTTTAGGTTTGGAATAGGAGTGGATGGAAAGAAGGATCACACTGTGGTGGAGCTTGGAAGTATTGACACACACAGACTTCTTCTCAGTGGTGGAGAGAGACAGAAAAAACAACAACCTCTCACCAACTCTCTCTCTTCCAGGCAAATGAAATCCCTATCTGCTCTCTGTGACAGTATCTTACCTTCCGTCGACCACTCTGTTCACACTTCCGATGAATCTGTCAACAAGTTCTATCGGATTTCAGCTTCCATGGCAGGCACACCAGAACTTCTAGGGGGAGTGATGTGTGAGAAGCTGAAACACCCATTGACAGGGTTACTGAAGTTGGCGTTATGGGGGTTGTCAACGTGGTTTGGAACATTAATTTTGTGTGGGATGGGGTGTGTCTCAACAAAATTTCCCTTCATCCATAGCTTTCCTGAGTTGTCTCTGCAAAAAAGACAAGACATCATGCGATCATGGTCTCTCAGTTACATTCGTCTCTTGAGACTGCTCTTCAGGACCATCAAACTTCTCACTCTCCTTGTCTTCTTTACTCAGACAGATGAATCAGAAGAGAACCTTTCATGGAAAGCAATTGGATACTGTGGACCTGATCCAAAATTCAAAGCTCAGTTGAAGAACCACTTTTTAGATGGAAAATCTAAGGAAGCAGAAGATGATAAGGAAGATGAAGATGCAGAAGAGGTGATAGGACCCCTCTACAAAGGTCTTGTCCATCTGAATAACCCACGAGACATCGCTGCAGATGCTCTGAGACGGTTAGGATTCTCTGTCTCTGTCGTTCGTAGAAAGCACAAAGCTGCAGCAAACTTGTCTTCTCCTTCTTTGGTGATTCAATGTGATGCTGTGGTGGTTGGTTCTGGCTCAGGGGGTGGAGTCATAGCTGGTGTTCTGGCAAAAGCTGGTTACAAAGTGTTGGTGTTGGAAAAAGGAGGGTATTCTGCAAGGAACAATCTTTCCCTTCTTGAAGGACAATCCATGGATCAAATGTACCTCAATGCTGGATTGGTTGCAAGTGATGACATGGGTATGTTCATACTTTCAGGATCCACTGTTGGTGGAGGGTCGGCGGTAAACTGGTCTGCTTCCATTAAAACCCCACAGCATGTGTGCAAGGAATGGTGTGAGAAACATGGGCTTGAGCTGTTTGAGAGTGAATTGTATAGAGAAGCCTTGGATGCTGTCTGTGAGAAGATGGGAGTTCAATCTGAGATTGAAGATGAAGGATTCAACAATGCTGTTCTGAGAAAAGGGTGTCAAGAGATGGGGTATCCTGTGAATACAATTCCTAGGAATTCTTCATCGGATCATTACTGTGGCTGGTGCTGCATGGGTTGTAAGGATGGGAAGAAGAAGGGCACCTTAGAAACATGGTTGGTGGACTTGGTGAAATCTGGAAATGGAGCAATTCTTCCAGGTTGTGAGGCACTAAAAGTCTTGCACAAGAATATGGAAGGGAGGGATAGAAAGGTTGCAGGTGGAGTGGCCTTTGAATTTGAATATAAAGGGATTAAGGACATTTGTGTGGTGGAGTCCAAGGTGACCATTGTAGCATGTGGAGCTCTATGTACTCCAGCATTGCTTAAAAGAAGTGGCTTAAGGAATCAGAACATTGGGAGGAACTTACATCTTCATCCAGTGACAATGGCTTGGGGCTACTTCCCAGATGAACCTGCTTCTGAGGTGTGGCCGGAGGCAAATAAGAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCCTCTGTTGTTGCAGAGTTTGAACAATCTGGATATGGTGCAGTGATCCAAACACCTTCGTTGCATCCTGGCATGTTCTCAATTGTCACACCGTGGACTTCTGGAGTCGATATAAGAGATCGAATGCGAAAATTTTCTAGAACAGCTCATGTATTTGCACTGGCAAGGGATAAAGGATCAGGTACTGTGGAATCACCACATCGTATCAGTTATAAATTGGCAGGTGTAGATGAAAAGAACTTGCAGAAAGGAATTGATAAGGTGCTGAGAATTCTGGCGGCTGCTGGAGCTGAAGAAATTGGAACACATCATAATAAGGGAAGGACCTTAAATGTAAAGCAAGTGAGCTATCATGAGTTTGAGAAGTTCGTTAAGGAAGAAAGTTCAAGGCCACTGACAGACCTTTCAACACCATTGTGTTCAGCACATCAAATGGGGAGTTGCAGGATGGGTTCTAATCCAAAGCAATCAGTGGTGAATCAGACAGGAGAAACATGGGAAATGGAAGGCCTTTATGTGGCTGATACAATTAGGAATGGTATCTCCTTCAAAACAATGATAGACACTTTGGGAAGGAAGTCTCAACTACTACTACAAAGGAAGAGACTCAAAGAAGAGGAGGATGATGACCAACACATTCAAGGCACCAAAATCAACCAACCCACCATGGTGGAAAGTCCTCCTAAATTCAAATTCACATTCATCTTCTTCATCATCTTCTCCCTCTCTCTTGGCTTAGTTTCCTTCTCCTTGTGCATAGCCTCTGAGATTAAGAGGAACAAGAAGGAGGATCTCAGATGGAATGGGAGACTGTGTCATTTACCGTCAAGTCCAGCATTTGGATTGGGAATTGCATCATTGGTTTGTTTGGCTTTGGTGCAGAGCATTGGGAATTCTATATTGTTCAAGAATTGCTGTTCAGGAGGGAAAAGAAACGCACGGTTTAAGATACCTATCGTTGCAAGGATTCTGCTTTCGATCTCTTGGTTGGCAAATTCAATCATTTTCAGTGTGAAGACTGCAAAGCTAGAAAGGGTTGGGTTTGGAATTGCAGTTATTTTATTAATTGCTGCGACAAGCATGAGCAAAAGGCAAGCATATGGGGAAGGGTGGTTGAAAGGTGAATGCTACCTTGTCAAAAAAGGGACATACGCTGGTTTAGCCATATTGATTTTAGTTACAGTAGGATCGTTAATAGGTTCAGGTTTGTTAACAATGAAGAGCAATAAGGCAGATCAGGGTCACAAAATACACGCACAAACGGGTGAAACTAGGGATTAA 3069 0.4373 MEDRTIGRSGSSRKGSFRFGIGVDGKKDHTVVELGSIDTHRLLLSGGERQKKQQPLTNSLSSRQMKSLSALCDSILPSVDHSVHTSDESVNKFYRISASMAGTPELLGGVMCEKLKHPLTGLLKLALWGLSTWFGTLILCGMGCVSTKFPFIHSFPELSLQKRQDIMRSWSLSYIRLLRLLFRTIKLLTLLVFFTQTDESEENLSWKAIGYCGPDPKFKAQLKNHFLDGKSKEAEDDKEDEDAEEVIGPLYKGLVHLNNPRDIAADALRRLGFSVSVVRRKHKAAANLSSPSLVIQCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGGYSARNNLSLLEGQSMDQMYLNAGLVASDDMGMFILSGSTVGGGSAVNWSASIKTPQHVCKEWCEKHGLELFESELYREALDAVCEKMGVQSEIEDEGFNNAVLRKGCQEMGYPVNTIPRNSSSDHYCGWCCMGCKDGKKKGTLETWLVDLVKSGNGAILPGCEALKVLHKNMEGRDRKVAGGVAFEFEYKGIKDICVVESKVTIVACGALCTPALLKRSGLRNQNIGRNLHLHPVTMAWGYFPDEPASEVWPEANKKSYEGGIMTAMSSVVAEFEQSGYGAVIQTPSLHPGMFSIVTPWTSGVDIRDRMRKFSRTAHVFALARDKGSGTVESPHRISYKLAGVDEKNLQKGIDKVLRILAAAGAEEIGTHHNKGRTLNVKQVSYHEFEKFVKEESSRPLTDLSTPLCSAHQMGSCRMGSNPKQSVVNQTGETWEMEGLYVADTIRNGISFKTMIDTLGRKSQLLLQRKRLKEEEDDDQHIQGTKINQPTMVESPPKFKFTFIFFIIFSLSLGLVSFSLCIASEIKRNKKEDLRWNGRLCHLPSSPAFGLGIASLVCLALVQSIGNSILFKNCCSGGKRNARFKIPIVARILLSISWLANSIIFSVKTAKLERVGFGIAVILLIAATSMSKRQAYGEGWLKGECYLVKKGTYAGLAILILVTVGSLIGSGLLTMKSNKADQGHKIHAQTGETRD 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00949 1022 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 54 772 - -
Vian10g00949 1022 Pfam Protein of unknown function (DUF1218) 883 991 IPR009606 -
Vian10g00949 1022 Pfam GMC oxidoreductase 664 771 IPR007867 GO:0016614
Vian10g00949 1022 Gene3D - 679 773 IPR036188 -
Vian10g00949 1022 SUPERFAMILY FAD/NAD(P)-binding domain 296 777 IPR036188 -
Vian10g00949 1022 Gene3D - 282 609 IPR036188 -
Vian10g00949 1022 Pfam GMC oxidoreductase 298 564 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00949 Vian-Chr10 9950391 9961580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00949 27 772 Acyl Lipid Metabolism Gene Families AT4G19380 56.325 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00949 K17756 - gmx:100775376 1300.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00949 10 9950391 9961580 Vian10g00949 10 9950391 9961580 ECH