Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00947 ATGGAGCAGCTGAAGACGCTGGGTAGAGAACTTGCAATGGGGTCGCACGGGCAGTCGAAGGAGTTTCTGGACCTCATCAAGTCCATCGGCGAGGCCCGATCCAAGGCCGAGGAGGACCGCATCGTCCTCCGCGAGATCGAAACCCTAAAGCGACGCATCAACGACGCAGACACGCCCAAGCGCAAGATGAAGGAGTACATCATACGCCTCCTCTACGTCGAGATGCTCGGCCACGACGCCTCCTTCGGCTACATTCACGCCGTCAAGATGACTCACGACGACGCCCTCCTCCTCAAGCGCACGGGATACCTTGCCGTAACCCTCTTCCTCAGCGACGATCACGACCTCATCATCCTCATCGTTAACACCATCCAGAAGGATCTCGCCTCTGATAACTACCTCGTCGTCTGCGCCGCCCTCAACGCCGTCTGCCGCCTCATCAACGAGGAGACCATTCCCGCTGTCCTCCCCCGCGTCGTCGACCTCCTTAACCACCCCAAGGACGCTGTCCGGAAGAAGGCCGTTATGGCGTTGCATCGCTTCTACCAGAAATCTCCCTCCTCCGTCTCCCATCTGTTAACCAATTTTCGAAAGCGCTTGTGCGATAACGATCCCGGAGTCATGGGCGCTTCTCTTTGCCCTCTCTTTAATCTCGTCTCCGACGATGCTAATTCTTACAAGGATCTTGTGGTCAGCTTCGTCAACATTCTTAAACAGGTCGCAGAACACCGGTTGCCCAAGACTTATGATTATCACCAAATGCCTGCACCCTTCATTCAGATTAAGATGCTGAAAATTCTCGCATTGTTGGGAAGTGGTGACAAGCAGGCTAGTGGACACATGTACACCGTGCTCGGTGATATAATTAGGAAGAGTGATTCCATGACCAACATAGGGAATGCTGTTCTCTATGAGTGTATATGCTGTGTTGCTTCTATATATCCCAATCCTAAGTTATTAGAGGCTGCAGCGGATGTGATTGCCAAATTTTTGAAGAGTGACAGTCATAATCTCAAGTACATGGGTATTGATGCCCTTGGTCGGTTGATAAAGTTAAGTCCACAAATTGCAGAACAACACCAACTGGCCGTCATTGATTGCTTAGAGGACCCTGATGATAGTCTGAAACGAAAAACTTTTGAACTGTTGTACAAAATGACCAAGTCTTCCAATGTGGAAGTGATTGTTGACAGAATGATTGATTACATGATTAGCATAAGTGATGACCATTATAAAACCTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATATTAAAGTGGCACATAATTTAATGCGGCTGATTGCTGAAGGATTTGGGGAGGATGATGATGCTGCAGATAGTCAGTTGAGATCATCTGCTGTTGAGTCATATTTGCGCATTATTGGAGAGCCCAAGCTTCCTTCTGTGTTTCTTCAAGTCATCTGTTGGGTTCTTGGGGAATATGGAACAGCGGATGGAAAGTATTCTGCTTCATACATCAGTGGAAAGTTATGTGATATTGCAGAGGCATATTCTAATGATGAAAATGTCAAGGCTTATGCAATTTCAGCATTGATGAAAATTTATGTGTTTGAAGTGGCAGCTAGGAGGAAAGTGGATATCCTACCTGAGTGTCAATCTTTGATTGAAGAATTATTAGCATCCCATTCTACAGATTTGCAGCAACGTGCTTATGAATTGCAGGCCCTTATAGGTTTGGGAGTACAAGCAGTTGAAACAATAATGCCAAGAGATGCAAGTTGTGAAGACATTGAGGTTGACAATAATCTTTCTTTCCTCGATGGTTATGTTCGGCAATCTCTAGAAAGGGGTGCTCAAGCCTATATTCCCGAGGATGAGCGCACTGGAATGGGGAATATGAACAATTTCAGAAGCCAGGATCACAATGAATCTTTGCAGCATGGTCTAAGATTTGAGGCATATGAAGTTCCAAAGGCACCAATTCAACTGAAAGCTACTCCAGTTTCATTTGCATCCTCAGCAGACATTGTTCCGGTACCTGAGGCACTTTCTTCCAGGGAAACTTACCATATTTCATCAGCGGGATCAACATCAGAAGCTGGATCGTCAGAGCTTAAGCTAAGGCTTGATGGTGTTCAGAAGAAGTGGGGTAGGCCTACTTATTCGTCTTCAGCTTCTTCTGCCTCTGATTCTTATTCTACATCACAAAAGTCAACAAACGGGGCGGCACAGGTGGATGGTGCTACAGCTGTTAATTCAAAAGTACGCGATAGTTATGATTCAAGAAAGACGCAGGTTGAGATTAATCCAGAAAAGCAAAAGCTTGCTGCTTCATTGTTTGGTGGTTCAACTAAAACTGAGAAAAGATTATCTACAAGCCATAAGGTTCCAAAATCTAATGCTGCAGACGGAGCTCAGGGATCAAAGGCTGCTGTTGTACCCAATGAGGTAGCTGTGGAAAAAACAATTCACCAACCCCCTCCTCCTGATTTGCTTGACTTAGGTGAATCAGCTGACACTACAGCTCCTCCCTCTGTGGATCCATTCCAGCAATTAGAAGGACTTTATGACCCAAGCATTAATTCTGGAATAGGTCATAATGTAGGTGCTACTACAAATGCCCCTGATATTATGGGATTGTATTCGGAGAGTACTGGCAGTGGTGACTATTCTATACCTGTAAGTGGGAATAATGTAAATCTTTTATCTGAATTGTCCAATCCAGCTGTAAAAGCTACTAGTGGAGAAACAATTACGACGCCTTTGCCCCAGTCTATTAAGGGTCCAAATGCTAAAGATTCGTTGGATAAGGATGCACTAGTGAGGCAGATGGGTGTGAACCCCTCAAGTCAGAATCCTAACTTGTTCAGTGACTTGCTTGGCTAA 2925 0.4533 MEQLKTLGRELAMGSHGQSKEFLDLIKSIGEARSKAEEDRIVLREIETLKRRINDADTPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDALLLKRTGYLAVTLFLSDDHDLIILIVNTIQKDLASDNYLVVCAALNAVCRLINEETIPAVLPRVVDLLNHPKDAVRKKAVMALHRFYQKSPSSVSHLLTNFRKRLCDNDPGVMGASLCPLFNLVSDDANSYKDLVVSFVNILKQVAEHRLPKTYDYHQMPAPFIQIKMLKILALLGSGDKQASGHMYTVLGDIIRKSDSMTNIGNAVLYECICCVASIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDSLKRKTFELLYKMTKSSNVEVIVDRMIDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYISGKLCDIAEAYSNDENVKAYAISALMKIYVFEVAARRKVDILPECQSLIEELLASHSTDLQQRAYELQALIGLGVQAVETIMPRDASCEDIEVDNNLSFLDGYVRQSLERGAQAYIPEDERTGMGNMNNFRSQDHNESLQHGLRFEAYEVPKAPIQLKATPVSFASSADIVPVPEALSSRETYHISSAGSTSEAGSSELKLRLDGVQKKWGRPTYSSSASSASDSYSTSQKSTNGAAQVDGATAVNSKVRDSYDSRKTQVEINPEKQKLAASLFGGSTKTEKRLSTSHKVPKSNAADGAQGSKAAVVPNEVAVEKTIHQPPPPDLLDLGESADTTAPPSVDPFQQLEGLYDPSINSGIGHNVGATTNAPDIMGLYSESTGSGDYSIPVSGNNVNLLSELSNPAVKATSGETITTPLPQSIKGPNAKDSLDKDALVRQMGVNPSSQNPNLFSDLLG 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00947 974 PIRSF AP4_epsilon 10 688 IPR017109 GO:0015031|GO:0030124
Vian10g00947 974 PIRSF AP4_epsilon 694 835 IPR017109 GO:0015031|GO:0030124
Vian10g00947 974 PIRSF AP4_epsilon 925 974 IPR017109 GO:0015031|GO:0030124
Vian10g00947 974 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 24 825 - -
Vian10g00947 974 SUPERFAMILY ARM repeat 36 632 IPR016024 -
Vian10g00947 974 Gene3D - 9 603 IPR011989 -
Vian10g00947 974 Pfam Adaptin N terminal region 46 590 IPR002553 GO:0006886|GO:0016192|GO:0030117
Vian10g00947 974 MobiDBLite consensus disorder prediction 730 760 - -
Vian10g00947 974 MobiDBLite consensus disorder prediction 835 858 - -
Vian10g00947 974 MobiDBLite consensus disorder prediction 729 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00947 Vian-Chr10 9905565 9918541 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00947 K12400 - gmx:100819573 1713.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00947 10 9905565 9918541 Vian10g00947 10 9905565 9918541 ECH