Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00942 ATGACCTTCTCCGAGGACGAGGACGAGACTCTGGCCCAATTTCTGGAATCAGAGGTTCTCTCGGAGGCATCTGACAAGGAAGAGGAAACTGGGGAGGAACCAAAAGCAAAGAGAAAGCGCACAGAGGAGGACGAGAGTACTAAAGGAAAAGAAATTTCTGATTCATCACCTGCACAGAAGAGCATGGTTGTCAACAATACTGTGTTGCAGAGAAGGATTGAGACTGGTTGTTTCAGCAAAGTTCCACCCGAGCTTTTCCATCATATCCTTAAATTTCTGTCTTCTGAGGACCTTGTTTCTTGTTCCTTAGTCTGTAGGTTTCTAAACTGTGCTGCATCAGATGAGTCATTGTGGCGTCGTCTGTACTGTATGCGATGGGGTCTTCTCCCCCCTACCCGGAAGTTAAGGGAATGCCCATGGAAGAAGTTATACATCCAGCGTGATGGAGAGGACATGGTTGAACTTGTTAGGAACTGCCAAAATGAGTTTAAGGAGTACTACATTCAAATGCAAGCAGCTAAGCGAAGTCAAGCTCCTCTTCCTTCACAGTTGAAGGACGATAGGATAATTCTTGACAAAACATTAGCTGATCAAGTGGCATCATGGAAAAGCAGCAGAGGCCTAAGTGATGTAGTGGTGGCTGATCATACTTGTTCTGGGGAAAATTGCTCTTACTACCAAATTGGAGATGTATTTATTTGTGAGAAGACTGGACAAGTTCATGTTTGTGACGATACATGTAGAGAAGTAATTATGGATCCCACAAACGAGCTTTTGGTATGTACAATATCAGGTCACTGTTTTGATAGATTGTTGTCACCTTCTGAAATGGAGCCTGATGCTGAGCAGCAGCAAGGTGGTGTGACTGATGAGGCAGAACCATTTATGGGATCTGGCCGTTTTGCACGAGCTTATTTGCTGGGGTACAATTGTGCTGATGAAAAGGAGCTTGAAGCTACTTTGAGGTTTTGCTGA 975 0.4441 MTFSEDEDETLAQFLESEVLSEASDKEEETGEEPKAKRKRTEEDESTKGKEISDSSPAQKSMVVNNTVLQRRIETGCFSKVPPELFHHILKFLSSEDLVSCSLVCRFLNCAASDESLWRRLYCMRWGLLPPTRKLRECPWKKLYIQRDGEDMVELVRNCQNEFKEYYIQMQAAKRSQAPLPSQLKDDRIILDKTLADQVASWKSSRGLSDVVVADHTCSGENCSYYQIGDVFICEKTGQVHVCDDTCREVIMDPTNELLVCTISGHCFDRLLSPSEMEPDAEQQQGGVTDEAEPFMGSGRFARAYLLGYNCADEKELEATLRFC 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00942 324 CDD F-box_AtSKIP31-like 78 123 - -
Vian10g00942 324 MobiDBLite consensus disorder prediction 28 51 - -
Vian10g00942 324 FunFam F-box family protein-like 65 152 - -
Vian10g00942 324 Pfam UL92 family 223 289 IPR004289 -
Vian10g00942 324 MobiDBLite consensus disorder prediction 1 59 - -
Vian10g00942 324 Pfam F-box-like 80 123 IPR001810 GO:0005515
Vian10g00942 324 SUPERFAMILY F-box domain 72 147 IPR036047 GO:0005515
Vian10g00942 324 Gene3D - 62 152 - -
Vian10g00942 324 SMART fbox_2 81 121 IPR001810 GO:0005515
Vian10g00942 324 ProSiteProfiles F-box domain profile. 75 121 IPR001810 GO:0005515
Vian10g00942 324 PANTHER F-BOX ONLY PROTEIN 3 4 322 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00942 - - gmx:100778591 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00942 10 9798167 9800845 Vian10g00942 10 9798167 9800845 ECH