Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00938 ATGGAGGGGGAAGAAGGAGGAGGCATAAGGCTGAGCAAGCGAATCGCGAACGGAGAAGTTGATTACAAGACCAAATCCGGCACCGCATGGAGCCACTCCTATCTCAACCAGAAGCCATGGCATCCTCTCTCTTATCCCAACCAACGCCGCAAGTGGATCGCCGAACAAACCCACGCCAATCGCCAACGCCGCGTCGAAGAGGTTTCTCGCGAGTTCGCGCAGGAGCAGGAGTTTTTTCGCCAAACCGCTCTCATCTCCAAGAAGGAGAAAGAAAAGGTGGAGCTTATGCAAGCTGTTAGTTTCATGTACGTTCGTCCTCCAGGTTACAATGCCGAAAGCGCCAAAGCTGCGGAGATGAATGATGAGAAGAAACGAGAGGACATGGACAAGGGACCTCAGCACGATGATGGACCTTCCTCTTCAGTGTACCGCCTCCGTCGCTTGCTTTGTAGTACAAATTTGATTGAAGAGAAGAAAAAACCGAGGCCCAAGGATGTTTTTGGGCGGCCTCTTCCGACAGAAGAAGAATTCGAAGTTCTTAAAAATGCACCAAGACTGGAAACAGGAGTTCCTGCCAGGGTGAAACCTTTTGCAGTTGAAGTTCGTAATGTAAAATGTTTAAGATGTGGGAACTATGGTCATCAAAGTGGTGATCGTGAATGTCCCTTGAAGGATGTTATAATGCCTAATGAGGAAAGCAGATTGAAAAGAGATGATCCCTTGAATGCTATCCTTGCTCACACAGATCCTACTGAGCCCCTAAAATGGGAGCTCAAACAGAGGCCAGGAATCAGTCCTCCTCGTGGAGGTTTCAAACCAGATGATCCCAACCAGCAGATAGTTGCCGAGGACATATTTGATGAGTATGGAGGTTTTCTTGGTATGGATAATATACCCGAGTTATTAACCAACTTTTCTAAGAAACCAAAGAAGTCCAAAAGGAGTAAGCACAAAAGGCAGCAACAAATAAATTCAGATAGTGAAGCATCATCTGACGATGGAGAAAGGAGACGTAAGAAAAAAAAGGTTAAGGTAAAGAAAAAGAAGCAAGATCATGCAAGGTCAAGTTCATCTGAAACTTCGGTCTCTGAAGAAGGCCATAGAAGGAGCAGATACAAGAGTTTGCATTCGTCTGAAGATTCTGACAGTTACAAGAATTGTCAAAGTAGGTCTAAACAAGAGCGTTCCTTTTTGTCCAAAGGTTCTGAACGTCGTAGGCATGGTAGGAGTACACATGACAGAAGAAAGCATCCCTATTCGTCCGAAGATTCCGACAGTCAGACGGATGATCAAAGTAGAAAGAATGCACAAAAGCATGAGTGGAAATATACCAGAAAAAGTAAACATGACAGAAGAAAGTATACTGATTCATCAGAAGATTCTGACAGTCAGAGGGATGATCAAAGTAAAAAGAATGTACCAAAGCATGAGAGGAAAGATACAAAAAAAAGACCTCCATTTTCCAATGAGGATTCTGGTCCTGCATGTGATCATGCTGATAACAAGAGCAGGGATGTGATTTCTTATTCATCTGATTCCAGTCATCAAAGACAACCAAAGTTTAAACAGAGCAGCCATAAGCATTCATCAACCACCTATTCGGATTCTCAAAAGCATCAGAGAAATTTTGGTTTCGATCGCTACCAAGGAAATCAGAAGAGCGGAGCTGTGCAATCTTATTCACCTGAAGATTCTGATGGGGACAGAGATTATCAAAATAGAAGAATCAAACCAAGTTATAGGCCCAAGTATTCTGGACATCCCGAGAATGATATGGATAAAGAGAACAGAAAAAAGCGGTATTCATGGAACGAATCTATTGCCGATGGATTTCATAGAAGTAAAAGAGGTAGATATGAGCGTTCGTATTCATCCGATTATTCTGATCATCGTGAGAAACATCACGAGTCAAGAAGGAACTACAAGCGATGA 1932 0.4332 MEGEEGGGIRLSKRIANGEVDYKTKSGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQTHANRQRRVEEVSREFAQEQEFFRQTALISKKEKEKVELMQAVSFMYVRPPGYNAESAKAAEMNDEKKREDMDKGPQHDDGPSSSVYRLRRLLCSTNLIEEKKKPRPKDVFGRPLPTEEEFEVLKNAPRLETGVPARVKPFAVEVRNVKCLRCGNYGHQSGDRECPLKDVIMPNEESRLKRDDPLNAILAHTDPTEPLKWELKQRPGISPPRGGFKPDDPNQQIVAEDIFDEYGGFLGMDNIPELLTNFSKKPKKSKRSKHKRQQQINSDSEASSDDGERRRKKKKVKVKKKKQDHARSSSSETSVSEEGHRRSRYKSLHSSEDSDSYKNCQSRSKQERSFLSKGSERRRHGRSTHDRRKHPYSSEDSDSQTDDQSRKNAQKHEWKYTRKSKHDRRKYTDSSEDSDSQRDDQSKKNVPKHERKDTKKRPPFSNEDSGPACDHADNKSRDVISYSSDSSHQRQPKFKQSSHKHSSTTYSDSQKHQRNFGFDRYQGNQKSGAVQSYSPEDSDGDRDYQNRRIKPSYRPKYSGHPENDMDKENRKKRYSWNESIADGFHRSKRGRYERSYSSDYSDHREKHHESRRNYKR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00938 643 MobiDBLite consensus disorder prediction 319 338 - -
Vian10g00938 643 MobiDBLite consensus disorder prediction 113 141 - -
Vian10g00938 643 MobiDBLite consensus disorder prediction 563 635 - -
Vian10g00938 643 MobiDBLite consensus disorder prediction 258 277 - -
Vian10g00938 643 MobiDBLite consensus disorder prediction 450 487 - -
Vian10g00938 643 MobiDBLite consensus disorder prediction 304 643 - -
Vian10g00938 643 MobiDBLite consensus disorder prediction 415 438 - -
Vian10g00938 643 MobiDBLite consensus disorder prediction 116 134 - -
Vian10g00938 643 Pfam N-terminal domain of CBF1 interacting co-repressor CIR 40 75 IPR019339 -
Vian10g00938 643 SMART Cir_N_3 39 75 IPR019339 -
Vian10g00938 643 PANTHER CBF1 INTERACTING COREPRESSOR CIR 8 475 IPR040014 GO:0003714
Vian10g00938 643 MobiDBLite consensus disorder prediction 361 389 - -
Vian10g00938 643 MobiDBLite consensus disorder prediction 525 561 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00938 - K06066 vra:106778095 1158.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00938 10 9750089 9754536 Vian10g00938 10 9750089 9754536 ECH