Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00932 ATGGTCCCTAAACCAGTCATAGTGACAAGACCACCACCACCGGTCTATTCTCCGCCCAACCCTCTTCTAAAAACCGCAGTATCAACCGTTAAAACAGAAGAAAAACCCCAAACCACCACCCTTCCCCCACCGTCTACCACCACTCCGAAAACGAACCCAGTTCCATCCATCAAAACGACGCCGCAGCAACGACTGGAACTAAAAAGGAAAACGAATTCATGGGCGCCAGCAGCGCTAATGCTGAACGCGTTGGACAACATCATCAACAACTTCATTGACCCTCCGCTCAAACCCTCCTTAGACCCCAGACACGTCCTGTCCCAAAACTTCGCCCCCGTCGATGAACTCCCTCCCACGGAGTGCCAAGTCGTCCAGGGCGCCCTCCCGCCATGCCTCGACGGCGCGTACATTCGAAACGGCCCAAACCCTCAGTTCCTCCCGCGTGGGCCCTATCACCTCTTCGACGGCGACGGCATGTTACACGCGCTACGCATATCCCAAGGCAAACCCACTCTCTGTAGCCGCTACGTCAAAACCTACAAATACACTATGGAAAACGACGCCGGTTTTCCACTCATCCCCAACGTCTTCTCCGGCTTCAACTCCCTCGTTGCCTCCGCGGCGCGTGGCTCTCTCTCCGCGGCGAGGATCGTCACCGGACAGTTCAATCCTTCTAATGGCATTGGGTTGGCCAACACCAGCTTAGCCTTCTTCGGTAACCGTCTCTTCGCGTTAGGCGAATCCGACCTCCCCTACGCTGTCAATGTTACCAGTAACGGCGACGTCGAAACAATCGGCCGTTACGACTTCAACGGCAAACTTACGTTCAGCATGACGGCGCATCCGAAGATAGACCCCGACACAGGGGAATGCTTCGCCTTCCGTTACGGCCCCGTTCCCCCGTTCCTAACCTACTTCCGTTTTGACCGTAACGGGAACAAATACGACGACGTGCCTATCTTCTCCATGACTTCACCTTCGTTTCTCCACGACTTCGCCATCACCAAGAACTATGCAGTCTTCTGCGACATTCAGCTCGGAATGAATCCTCTCGACATGATCGCCGGTGGCTCCCCCGTCGGCTCCGTCGCTTCCAAGGTCCCAAGGATCGGAATCCTTCCTCGTGATGCTAAGGACGAATCCAAGATGAAGTGGTTCGACGTGCCGGGGTTTAACATAGTTCACGCGATAAACGCGTGGGAAGAGGACGGGGGAAGAACGGTGGTGCTGGTTGCGCCAAATGTTCTGTCGGTGGAGCACGCACTGGAAAGAATGGAGCTGATTCACGCGATGGTGGAGAAGGTGAAGATCGATCTGGAGACGGGGATTGTGACGCGGCAACCGGTGTCGGCGCGGAACCTTGATTTCGCGGTTATAAACCCGGCGTTCGTTGGGAAGAAGAACAGGTTCGTTTACGCGGCGGTGGGCGACCCGATGCCGAAGATCTCGGGGGTGGTGAAGCTGGACGTGTCGAAGGCGAATGAGCGGAGGGACTGTACGGTGGGATGCAGGATGTTCGGCGAGGGGTGCTACGGCGGGGAACCGTTCTTCGTGGCGAAGGAGGAAGGGGGTGAGGAGGACGATGGGTACTTGGTGACGTACGTGCACGACGAGAGGAAGAGAGAGTCAACGTTCTTGGTGATGGACACGAAGTCGCCGGAGCTGGACGTGGTGGCGGAGGTGAAGCTTCCACGGCGGGTTCCGTACGGTTTTCATGGTTTGTTCGTGAAGGAAAGTGATCTTAGGAAAACGGTGTCGTTGTGA 1764 0.5624 MVPKPVIVTRPPPPVYSPPNPLLKTAVSTVKTEEKPQTTTLPPPSTTTPKTNPVPSIKTTPQQRLELKRKTNSWAPAALMLNALDNIINNFIDPPLKPSLDPRHVLSQNFAPVDELPPTECQVVQGALPPCLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHALRISQGKPTLCSRYVKTYKYTMENDAGFPLIPNVFSGFNSLVASAARGSLSAARIVTGQFNPSNGIGLANTSLAFFGNRLFALGESDLPYAVNVTSNGDVETIGRYDFNGKLTFSMTAHPKIDPDTGECFAFRYGPVPPFLTYFRFDRNGNKYDDVPIFSMTSPSFLHDFAITKNYAVFCDIQLGMNPLDMIAGGSPVGSVASKVPRIGILPRDAKDESKMKWFDVPGFNIVHAINAWEEDGGRTVVLVAPNVLSVEHALERMELIHAMVEKVKIDLETGIVTRQPVSARNLDFAVINPAFVGKKNRFVYAAVGDPMPKISGVVKLDVSKANERRDCTVGCRMFGEGCYGGEPFFVAKEEGGEEDDGYLVTYVHDERKRESTFLVMDTKSPELDVVAEVKLPRRVPYGFHGLFVKESDLRKTVSL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00932 587 Pfam Retinal pigment epithelial membrane protein 112 577 IPR004294 GO:0016702
Vian10g00932 587 MobiDBLite consensus disorder prediction 1 63 - -
Vian10g00932 587 MobiDBLite consensus disorder prediction 1 20 - -
Vian10g00932 587 MobiDBLite consensus disorder prediction 22 41 - -
Vian10g00932 587 PANTHER BETA-CAROTENE DIOXYGENASE 113 577 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00932 Vian-Chr10 9657938 9659825 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00932 K09840 - gmx:100777875 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00932 10 9657938 9659825 Vian10g00932 10 9657938 9659825 ECH