Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00924 ATGGCGGAGAAGTTCCCAGTAGTGATTGATGTGCAGAAAATTGGTGAGGAAGAAGAGTTAAAGAAACTAAGAGAAGCATGTGAAAAATGGGGTTCTTTCAGGATCATCAATCACTCTATTCCTCCAACCCTAGTGGCTGACATGAAGAAGGTGGTTGAAGCTCTGCATGATCTTCCTTTTGAGACCAAGAAACGCAACACAGAAGCCATTGCTGGTGGTGGTTACGTCGGACCAACTCCACTCAGCCCCTTATACGAGGCTATAGGAATCTATGACATTTCTTCATCACAATCTATGCACAATTTCTGTTCTCAGCTTCATGTCTCTCCTCAACAAAGGCAAATAATGGAGGCATATGGGCAAGCTGTTCATGGTTTGGCAGTAAAAATAGGACAAAAGATGGCTGAATCTCTTGGTGTAGTTGAAGGTGCTGATTTCGAGGACTGGCTCTACGAGTTTAGATTTAACAAATATAACTTCACGGCAGAAACAATAGGGTCCCCAGGAGTTCAAATACACACAGATTCAAGCTTCCTATCTGTTCTTAAAGATGATGAAAATGTTGGTGGTCTTGAAGTCATGGACTCTTCTTCCTCCTTTGTGCCAATCCCTCTTTTCCCTGGGACTTTTCTTGTCAATCTTGGAGACATTGCTCGTGCGTGGAGCAATGGGAGGTTTTGCAATGTGACACATCGTGTGCAATGCCAGGAAGGGAACCAACGTCTTTCAATTGCTACGTTAATCTTAGGACCCAAGAACAGGAATGTTGAGGCCCCAGAGGAATTGGTGAACCATGATCACCCCCGTTTTTATCAACCTTTTGTTTATGAAGATTATAGGAATCTCAAAGTTAGTAAGAAGATTCCCACTAAAGAAGCCCTAGAACTGTTCCGATTGGCCTAG 903 0.433 MAEKFPVVIDVQKIGEEEELKKLREACEKWGSFRIINHSIPPTLVADMKKVVEALHDLPFETKKRNTEAIAGGGYVGPTPLSPLYEAIGIYDISSSQSMHNFCSQLHVSPQQRQIMEAYGQAVHGLAVKIGQKMAESLGVVEGADFEDWLYEFRFNKYNFTAETIGSPGVQIHTDSSFLSVLKDDENVGGLEVMDSSSSFVPIPLFPGTFLVNLGDIARAWSNGRFCNVTHRVQCQEGNQRLSIATLILGPKNRNVEAPEELVNHDHPRFYQPFVYEDYRNLKVSKKIPTKEALELFRLA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00924 300 FunFam 2-oxoglutarate-dependent dioxygenase DAO 5 296 - -
Vian10g00924 300 Gene3D - 2 281 IPR027443 -
Vian10g00924 300 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 69 IPR026992 -
Vian10g00924 300 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 283 - -
Vian10g00924 300 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 148 251 IPR005123 -
Vian10g00924 300 Pfam 2OG-Fe(II) oxygenase superfamily 167 247 IPR044861 -
Vian10g00924 300 SUPERFAMILY Clavaminate synthase-like 8 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00924 Vian-Chr10 9564316 9565845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00924 9 299 Glycosyltransferase AT5G59530 24.516 2.15e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00924 K23947 - gmx:100783059 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00924 10 9564316 9565845 Vian10g00924 10 9564316 9565845 ECH