Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00877 ATGGCATTTGCTTTCCATAACTACGCTGTTCCAGTTTTCCTTTCACTTTTGGCCGTAATCCCATTTGAGGGCACCGGTGGCTCCCATCTCAGCCACAACAACCGCCGTGAGCGTGGCAACCCTACTCCAAAATCCCTTCACTTCACCTTGTTCCAACACGAAAGCAGAAACAAAACAGGTTTTGTGATAGTGAATGGCGTGGAAGGAAGTGAAGGAAAGGGTGAAAGCTCAAGCCTTTTTGGCAGTCTTTTGGTCTTTCAGGACCCTTTGACTGCAAAAGCAAACAGATCCTCCAAACAACTGGGAACTGCAGAAGGAACTTCCATCACCTCTGGTCTTGATGGACTCAGCAGCATTTCTGTTGCAAAGTTAACTCTTCGGGTGAAGAATCACAAAGGCTCCATTTCCATTGTTGGAGGCACTAATACCTTCGAGCGTTCGGATTATCCAGTTGTAGGAGGCACGGAAGATTTCTTGTTTGTTAATGGCTATGTTACCTCTTCTCCCCTTCAGGCAAAGTCTTCAACACTTGTCTACGAGATTGGTTTTCATCTTTACTGGCCTCCATATCCATCTCCACCTTCTTATTAA 591 0.4585 MAFAFHNYAVPVFLSLLAVIPFEGTGGSHLSHNNRRERGNPTPKSLHFTLFQHESRNKTGFVIVNGVEGSEGKGESSSLFGSLLVFQDPLTAKANRSSKQLGTAEGTSITSGLDGLSSISVAKLTLRVKNHKGSISIVGGTNTFERSDYPVVGGTEDFLFVNGYVTSSPLQAKSSTLVYEIGFHLYWPPYPSPPSY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00877 196 PANTHER DIRIGENT PROTEIN 1 191 - -
Vian10g00877 196 Pfam Dirigent-like protein 47 183 IPR004265 -
Vian10g00877 196 Gene3D - 28 186 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00877 Vian-Chr10 8884788 8885378 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00877 - - gmx:100306565 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00877 10 8884788 8885378 Vian10g00877 10 8884788 8885378 ECH