Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00876 ATGATGGAGAAGGCAGATTCTGTGCAGAAGCTGTATACGCGCATGCGGCTCTGGGCATTTCCGGATCAGTTTGTGATTGAGCCTACGGATGGATCTTCTGGTTCTTCTTTGGCTGTTAGTCGAGTCGATGGCTCCATGAAGCTCATCGATGAGGTTCCGGAATGCAGCTCGCTTCGTGTTCCTAAGATATATACAATTTTTGGTGTTGTAGGGATGTTGAGGCTATTGGCTGGATCATATTTGCTGGTTATAACTGAGCGTGAGTCTGTTGGATCTTACTTGGGGCATCCGATTTTCAAAATTTCTTCATTGAAGGTTTTCCCATGTGATAACTCTCTTAAAAACACTCCTGCTGAACAGAAGAAAATAGAGACGGAATTTTCTGCACTGCTTAATGTTGCTGAGAAGAGCTCTGGTCTGTTCTTCTCATACGAAACTAATTTAACTCTGAGTGCACAGCGATTGAATGACTTGGGTGACGAGTCTAGATTGCTTCCACTTTGGAGACAGGCAGAGCCTCGATTCTTATGGAACAATTATATGTTAGAAGTGCTCATAGATAACAAGGTAGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGTTATGTTGCTAATTTTGTGGAAACAGAACAGATTATGCAGTTTAATGGGTATACTGCGTCATTTGTTCAGGTGCGTGGTTCAATCCCACTCCTCTGGCAGCAAATTGTTGATTTAACTTATAAACCAAAGTTTGAGTTGTTGAAACTTGAGGAGGCTCCACGAGTCCTAGAGAGGCATTTCTTAGATTTAAGGAAAAAATACGGGGCTGTATTGGTTGTTGATCTTGTTAACACGCATGTGGCTAGCAATGATGTAAGATTTTCTGGAAAGAAACGGAGCATGATAGGTCGAAATATGTTGGAATATCAACTTAGAAGACTCGGTGTCTTTGGTGCGGAAGAAACCATTAGTTCACATCCAAATCTGGATGAAAGCTTTAAGATCTCACTTGAAACTAGATTTCTGACTGATTCTCTTTGGTTTGGGCACCGCACAGTTCAAGGGATAGTACAAGATGGTTGTAATGCTCTTCTACGATATTATTACAATAACTTTCGTGATGGAACAAAGCAGGATGCAATTGATCTCATACAAGGACATTATATAGTTTCTGTCAGCCGAGATACAGCTGCCAGTTCTCAGAAAGGAGGCCTTGAAGCTATAGCTTCATTTCCCATGGCTTTTGCTCTGGTTTTGACTGGATTTCTCTTTGCAACCATGTCTTTGAGGCAAGTGCAATACGATTTTCGGCACTTCTTCTTTTCACTAATGTGGGCGGGCATTAGTGTGGGTATAGCAGCATTTGTGAGGGCCAACGGCCGTGTTTTCTGCAACAGACCTCGCCTACACAATCCCCGGTGA 1410 0.4277 MMEKADSVQKLYTRMRLWAFPDQFVIEPTDGSSGSSLAVSRVDGSMKLIDEVPECSSLRVPKIYTIFGVVGMLRLLAGSYLLVITERESVGSYLGHPIFKISSLKVFPCDNSLKNTPAEQKKIETEFSALLNVAEKSSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKVGTRMWRRGADPDGYVANFVETEQIMQFNGYTASFVQVRGSIPLLWQQIVDLTYKPKFELLKLEEAPRVLERHFLDLRKKYGAVLVVDLVNTHVASNDVRFSGKKRSMIGRNMLEYQLRRLGVFGAEETISSHPNLDESFKISLETRFLTDSLWFGHRTVQGIVQDGCNALLRYYYNNFRDGTKQDAIDLIQGHYIVSVSRDTAASSQKGGLEAIASFPMAFALVLTGFLFATMSLRQVQYDFRHFFFSLMWAGISVGIAAFVRANGRVFCNRPRLHNPR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00876 469 ProSiteProfiles Sac phosphatase domain profile. 131 187 IPR002013 GO:0016791
Vian10g00876 469 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 188 - -
Vian10g00876 469 Pfam SacI homology domain 67 187 IPR002013 GO:0016791
Vian10g00876 469 Pfam SacI homology domain 190 282 IPR002013 GO:0016791
Vian10g00876 469 ProSiteProfiles Sac phosphatase domain profile. 189 287 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00876 Vian-Chr10 8870368 8881915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00876 295 469 Acyl Lipid Metabolism Gene Families AT3G51460 60.526 6.23e-71 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00876 K21797 - egt:105965788 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00876 10 8870368 8881915 Vian10g00876 10 8870368 8881915 ECH