Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00854 ATGGCAGTGTTTCTATGGACAGTTGACATGTTTCGTTGCAATGGATGGTGCTTTCCATGGGTCATGCCTCTTATTGGTGGCACCAATATTTGCCTAAGGAATGTCTCAGCAAAAGGTATATTTGATGCAATTCACCGTTACAAGGTAACTCATTTTTGTGGTGCACCTACCCTTTTGGACATGATTGCAAATGCATCACCAACTGACCAGAGGCCTCTGCCTCATAGGGTGAATGTCACAGTTGCTGGTGTGCTACCACCTACCCATGTTCTCAACAAGGTATCACAGCTTGGATTTGATGTGAACATAGGATATGGTATGACAGAGACTTATGGTCCTTTCACTATAAGACCATGGAACCCCACTTCAGATGGTGAACATACAAAGCTGAATTATGGTATGTCAGAGGTTATGCAGAATGTTGATGTGAAGGATCCAAAGACTAATGAAAGTACTCCTCCTGATGGTAAAACCATAGGTGAAATTGTGTTCAAAGGGGAAGCTTTGATGATGGGGTACCTTAAAAATCCACAAGCAACTGAAGAGGCTATTAGGGGTGGATGGTATATGACTGGGGACCTTGGTGTTAGACAACCAAATGGTTCTATAACAATGAAGGATAGAGCAAAGGATATGATGTATTGTGAGGGAGGAGCTGTGAGCTCACTAGAGGTGGAAGCAGTGCTGTTGAATCATCCAAAGGTTTTGAAAGCTGCTGTTGTGGGGAGATGTGATGAATATTTGGTGGAATCACCATTTGCAATTGTTGAATTGAGAGAAGGATGCAGAGCCACTGTTGAAGAAATCATCAAGTTCTGTGAAGATCATTTGGCGAGTCATATGGTTCCTAGGAGTGTGGTATTTGGAGATTTACCTGTTAATTCAACTGGGAAGGTTCAGAAATTTCGCATCAGAGAGAAGATCAATACTGAGAGTGGTGTTACTCAATGA 951 0.4238 MAVFLWTVDMFRCNGWCFPWVMPLIGGTNICLRNVSAKGIFDAIHRYKVTHFCGAPTLLDMIANASPTDQRPLPHRVNVTVAGVLPPTHVLNKVSQLGFDVNIGYGMTETYGPFTIRPWNPTSDGEHTKLNYGMSEVMQNVDVKDPKTNESTPPDGKTIGEIVFKGEALMMGYLKNPQATEEAIRGGWYMTGDLGVRQPNGSITMKDRAKDMMYCEGGAVSSLEVEAVLLNHPKVLKAAVVGRCDEYLVESPFAIVELREGCRATVEEIIKFCEDHLASHMVPRSVVFGDLPVNSTGKVQKFRIREKINTESGVTQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00854 316 SUPERFAMILY Acetyl-CoA synthetase-like 3 308 - -
Vian10g00854 316 Gene3D - 210 313 IPR045851 -
Vian10g00854 316 Pfam AMP-binding enzyme C-terminal domain 224 298 IPR025110 -
Vian10g00854 316 PANTHER ACYL-ACTIVATING ENZYME 1 310 - -
Vian10g00854 316 Pfam AMP-binding enzyme 3 213 IPR000873 -
Vian10g00854 316 Gene3D - 1 209 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00854 Vian-Chr10 8525644 8526594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00854 4 307 Miscellaneous Gene Families AT1G20560 51.768 3.40e-113 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00854 - - vum:124835306 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00854 10 8525644 8526594 Vian10g00854 10 8525644 8526594 ECH