Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00848 ATGGCAAACAAGTTCCATATTCGCTCAAACAGTTTCCCTACTGGATCTCATCCTAGCATCAGTAGAGTAGAGGAAGAGCTGAACAAGCTCAAAACTTGGGAAGCCACTTCCACATCCACATCAAAGTCAATCGGCACTGGCTTGTCCTTGTTATCAGATTTGCATATTTGCTTGGAAGATATTCTCAACATGGCTTCAACCCAGAAGCTGATTTCTAACCATCAGGGTGAGAAATGCATAGAAGAGCTTCTGGATGGTTCAGTGAGAATTTTGGACATCTGTGACATCACAAGGGACACCTTGTTACAGATTAAAGAAAATGTTGAATCCCTTCATTCTGCTCTCAGAAGGAGAAAGGGGGATTCGAGCATTGAAAGAATTGTAGCCGAATATACATTGTTCTCAAAGAAGATGAAGAAGAATGCGAAGAAGTTGATGACAACTTTAAAACAGATGGAGAACAAATTTGGAGTATCCCCGGTGTTGGATGAAGACCAACAACTTGTTTCTTTGATTAGAGTGGTTAGGGAAGTCATTGGAACGAACATGTCTGTCTTCCAATCCCTGTTAGCTTTCTTGGTTGTGCCTGCTTCAAAGTCAAAGGCAACCAAATGGGTATTGGTAGCAAAATTAATGCACAAGGGAGTGATAGCATGTGAAGAGAAGCAGAAGAATTTGAACGAGTTGCAGTGTGTGGAAGCATCTTTAAGCAGCCTTCTGAGTGAAGGAACCAATGTTGCAAACATGGAAGCTGCTAATGAAAGATTGGAAGCTTTGGAGAATGGAATTGAAAGCATAGAAAATGGTTTGGAGAGCGTATTTAGGCGCATGGTTAGAACAAGAGCCTGCCTTTTGAACATCATGACTCAATAG 873 0.4147 MANKFHIRSNSFPTGSHPSISRVEEELNKLKTWEATSTSTSKSIGTGLSLLSDLHICLEDILNMASTQKLISNHQGEKCIEELLDGSVRILDICDITRDTLLQIKENVESLHSALRRRKGDSSIERIVAEYTLFSKKMKKNAKKLMTTLKQMENKFGVSPVLDEDQQLVSLIRVVREVIGTNMSVFQSLLAFLVVPASKSKATKWVLVAKLMHKGVIACEEKQKNLNELQCVEASLSSLLSEGTNVANMEAANERLEALENGIESIENGLESVFRRMVRTRACLLNIMTQ 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00848 290 Coils Coil 249 269 - -
Vian10g00848 290 Pfam Protein BPS1 47 287 IPR004320 GO:0048364|GO:0048367
Vian10g00848 290 Coils Coil 135 155 - -
Vian10g00848 290 PANTHER OS06G0725500 PROTEIN 2 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00848 Vian-Chr10 8465188 8466060 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00848 - - gmx:100801249 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00848 10 8465188 8466060 Vian10g00848 10 8465188 8466060 ECH