Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00741 ATGGCACTTTTTAAGACACGGAAGAGATCATCATCACCATCTTACGTATCAACCCTCACAATAGTTGTGTTCATTGCACTATGTGTTTTTGGCGTGTGGATGCTATCCTCCAAGTCAGTAGTGCCACCTCAAACACACAGCGATGAAGACATTGCAACCCGAACGTCCATTGATACCTCTGCAACCAATGATGAACTCTCTGCCTCCCATGGAATGGCTGAAAAAATTGCAGAAACCAGAAAAGACAGTTCCTCTTCTGTCTTTGGGGACAACCCTGGACAGCTTCCCGATGATGCCATAAAATCTGATGAAAAACATTCCAACATGGAGTCACAAAATCAGCACATCATGGCCAGCATGGACGCACAGCTTTCTGAGGAAAGCTCGTTAACTCAAAAGGAGCAAGCTTCCGTGATACACGAAGCCGGTGCAGATAGTGATGTGAAAATAACTGAGCCTGAGAAAGCTCAGCAAACCGTCACCACGGCTTCTAATAACATAAAAAAGGATGAAGAAATCGCCGCGGCGGCGGTGGAACAGGAGGTACAAAGCATTGGAAAGCAGCAAGACGTTCAAGGTTTTGACACTAAACCGGCGGAAGAAGATATAAACAAGGAACAACTTCGAGAGGACAAAGGCGCGGTTGAAGCAAATCCTAAAGCAGACGTGTTGCAACAGGACCCTGAGGCGGCTTTAAAGGGAACAAGTTCTGAGCAGGTGTCGGAGAAGATTGAAAACCAGAAAGTAGATGTGGTTGAGGTAACGCAGAAACCAAAAGCAGAGAAGAAAGGTCGTAAGTCAAAGAAGCAGTGGTCGACACAAGCTGCTCAGTCACAGAAAGAAAACAAAAGACAGCAAGTTGAATCAAACAGTGAAGAGAAACTTGAAGATCACGAATGGTACCTCTGCAATGTCACTGCCAATGAAGATTATATACCGTGTTTGGACAATGAAAAGGCAGTGAAACAGTTGCGTACCACAAGACACTACGAACACAGGGAAAGGCATTGCCCAAAGGATCCTCCTACTTGTCTCGTCCCACTTCCCAAAGGTTACAGAACGCCCATCGAGTGGCCTAACAGCAGAGATAAGATATGGTACCACAATGTACCACACAAGTTGCTAGCAGAGGTGAAGGGACACCAGAACTGGGTGAAGGTGACCGGAGAGTTCTTGACCTTCCCTGGAGGTGGCACTCAGTTCATTCACGGAGCTCTCCATTACATCGATTTTCTTCAACAGGCTCAACCTTCTATTGGATGGGGAAAGCACACACGGGTGATCTTGGATGTTGGGTGTGGGGTTGGTAGCTTTGGAGGGTTTCTATTCGAACGGGATGTTATTACAATGTCTTTTGCACCTAAAGACGAACATGAAGCACAAGTGCAATTTGCCCTTGAAAGAGGAATTCCTGCCATATCTGCTGTTATGGGTTCTCAAAGGCTGCCATTCCCCAGTCTTGTCTTTGATGCTATACATTGTGCACGTTGTCGAGTACCTTGGCATGTAGATGGTGGCATGTTGCTGTTGGAACTGAATCGGCTTTTGAGACCAGGTGGTTTATTTATTTGGTGTGCGACTCCTGTGTACCAGAAGCTTGAAGAAGATGTCGAGATATGGAAGGAAATGACCACACTGACAAAGTCCATTTGTTGGGTGCTTGTGACCATCAACAAGGATGAACTGAATCAGGTCGGTGCTGCTATTTATCGCAAACCCACTTCCAACGAATGCTACAACCAAAGGGCGCAAAGTGAACCTCCATTGTGCAAGGACGATGATGATCCAAATGCTGCCTGGTATGTGCCTCTGCAGGCATGCCTACACAGGGTGCCTGTGGACAAGACTGAGAGAGGAGCCAAATGGCCTGAAGCTTGGCCTCGTCGACTAAATAAACCTCCATATTGGTTAAACAACTCGCAGACTGGTATCTATGGAAAACCACCTGCCCAAGATTTTGCAGCAGATACTAATCGTTGGAAAAATGTTGTGGAGGAGTTGAGCAACATTGGTATAACTTGGACTGACGTGAGAAATGTCATGGACATGCGATCCATCTACGGGGGATTTGCGGCAGCTCTAAAGGATCTTCCCGTCTGGGTGTTCAATGTGGTGACCGTAGATACTCCGGACACACTTCCTGTCATCTATGAGAGAGGTCTTTTTGGGATATATCATGACTGGTGTGAATCCTTCAGCACGTATCCAAGATCTTATGATCTATTGCATGCAGATAGTCTTTTCTCAAAGCTGAAAGATAGGTGCAAACTAACAGCTGTTATGGCAGAGGTTGATAGAATAATTAGACCGGGAGGCAAGTTGATTGTCCGTGATGAACCTTCCACCCTCAGCGAAGTGCGAACTTTGTTAAATTCTCTACATTGGGAAATATTACATGACAAAATACAAGAGGGTGTACTTTGTGCAAAAAGAGGCAAATGGAGGCCTACGGCTATAGCAGTGTCCTGA 2469 0.4601 MALFKTRKRSSSPSYVSTLTIVVFIALCVFGVWMLSSKSVVPPQTHSDEDIATRTSIDTSATNDELSASHGMAEKIAETRKDSSSSVFGDNPGQLPDDAIKSDEKHSNMESQNQHIMASMDAQLSEESSLTQKEQASVIHEAGADSDVKITEPEKAQQTVTTASNNIKKDEEIAAAAVEQEVQSIGKQQDVQGFDTKPAEEDINKEQLREDKGAVEANPKADVLQQDPEAALKGTSSEQVSEKIENQKVDVVEVTQKPKAEKKGRKSKKQWSTQAAQSQKENKRQQVESNSEEKLEDHEWYLCNVTANEDYIPCLDNEKAVKQLRTTRHYEHRERHCPKDPPTCLVPLPKGYRTPIEWPNSRDKIWYHNVPHKLLAEVKGHQNWVKVTGEFLTFPGGGTQFIHGALHYIDFLQQAQPSIGWGKHTRVILDVGCGVGSFGGFLFERDVITMSFAPKDEHEAQVQFALERGIPAISAVMGSQRLPFPSLVFDAIHCARCRVPWHVDGGMLLLELNRLLRPGGLFIWCATPVYQKLEEDVEIWKEMTTLTKSICWVLVTINKDELNQVGAAIYRKPTSNECYNQRAQSEPPLCKDDDDPNAAWYVPLQACLHRVPVDKTERGAKWPEAWPRRLNKPPYWLNNSQTGIYGKPPAQDFAADTNRWKNVVEELSNIGITWTDVRNVMDMRSIYGGFAAALKDLPVWVFNVVTVDTPDTLPVIYERGLFGIYHDWCESFSTYPRSYDLLHADSLFSKLKDRCKLTAVMAEVDRIIRPGGKLIVRDEPSTLSEVRTLLNSLHWEILHDKIQEGVLCAKRGKWRPTAIAVS 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00741 822 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 310 804 IPR004159 GO:0008168
Vian10g00741 822 MobiDBLite consensus disorder prediction 40 67 - -
Vian10g00741 822 Gene3D Vaccinia Virus protein VP39 403 569 IPR029063 -
Vian10g00741 822 MobiDBLite consensus disorder prediction 270 284 - -
Vian10g00741 822 MobiDBLite consensus disorder prediction 243 260 - -
Vian10g00741 822 FunFam probable methyltransferase PMT23 400 584 - -
Vian10g00741 822 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 21 815 IPR004159 GO:0008168
Vian10g00741 822 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 334 579 IPR029063 -
Vian10g00741 822 MobiDBLite consensus disorder prediction 184 293 - -
Vian10g00741 822 MobiDBLite consensus disorder prediction 40 113 - -
Vian10g00741 822 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 659 797 IPR029063 -
Vian10g00741 822 MobiDBLite consensus disorder prediction 194 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00741 Vian-Chr10 7208151 7211540 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00741 - - gmx:100815117 1276.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00741 10 7208151 7211540 Vian10g00741 10 7208151 7211540 ECH