Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00740 ATGATGATGGGGTTAAGGTGGAGTATGATTGTAAGGGTGACGTTGACTGTTTTTGTGTTGTGGTTTGGAACACTGCACGTCCAAGCCTCTAATTCTGTTTCCGCCTTCGTTCAAAACGCCATCTACTCCAACAGAATCACCGTTTTCTCCAAATCCTATTGCCCCTATTGCTTGCGCGCCAAACGCATACTTGCTGAACTAAATGAGAAACCGTTTGTGGTGGAGCTCGATTTACGAGATGACGGGTATGAAATTCAGAGTGTTATTCTGGATTTGATCGGTCGAAGGACAGTGCCACAAGTATTTGTGAATGGCAAGCATATTGGTGGATCAGATGATCTCAGTGCTGCAGTCCAAAGTGGTGAGTTGCAGAAACTTCTCAGTGCAAGTTGA 393 0.4504 MMMGLRWSMIVRVTLTVFVLWFGTLHVQASNSVSAFVQNAIYSNRITVFSKSYCPYCLRAKRILAELNEKPFVVELDLRDDGYEIQSVILDLIGRRTVPQVFVNGKHIGGSDDLSAAVQSGELQKLLSAS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00740 130 Gene3D Glutaredoxin 27 130 - -
Vian10g00740 130 NCBIfam glutaredoxin 46 127 IPR011899 -
Vian10g00740 130 CDD GRX_GRXh_1_2_like 45 126 - -
Vian10g00740 130 ProSitePatterns Glutaredoxin active site. 48 64 IPR011767 -
Vian10g00740 130 Pfam Glutaredoxin 46 108 IPR002109 -
Vian10g00740 130 PRINTS Glutaredoxin signature 91 104 IPR014025 -
Vian10g00740 130 PRINTS Glutaredoxin signature 46 64 IPR014025 -
Vian10g00740 130 PRINTS Glutaredoxin signature 105 118 IPR014025 -
Vian10g00740 130 PANTHER GLUTAREDOXIN 2 27 128 - -
Vian10g00740 130 FunFam Glutaredoxin 2 28 130 - -
Vian10g00740 130 SUPERFAMILY Thioredoxin-like 35 128 IPR036249 -
Vian10g00740 130 ProSiteProfiles Glutaredoxin domain profile. 34 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00740 Vian-Chr10 7206283 7207388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00740 37 114 Miscellaneous Gene Families AT4G15700 30.769 3.38e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00740 K03676 - gmx:100500348 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00740 10 7206283 7207388 Vian10g00740 10 7206283 7207388 ECH