Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00737 ATGTCTGGTTCTTTCAAGCAGAAACTGAGGAATTCCTTGACGAAAAAGGGTAGGCGAAGCAGCAAGGTCATGTCCATTGAAATTGAGGATGTCCACGATGCTGAGGAGTTGAAAATAGTTGACGAGTTCCGTCAAGCTCTTATTTTGGACGAACTACTCCCTGCAAAACACGATGATTACCATATGATGCTTAGATTCCTCAAGGCCAGAAAGTTTGATGTTGAGAAAACAAAGGAAATGTGGACTGAAATGCTCAAATGGAGGAAGGAGTTTGGTGCTGACACTATTCAGGAGGACTTTGATTTCAAAGAAATTGATGAAGTTTTGCAATATTATCCCCAAGGACACCATGGAGTGGACAAAGAGGGAAGGCCTGTATATATCGAGAGACTAGGCCAAGTCGATGCCGGGAAAATGATGCAAGTCACAACCATGGATCGCTATATCAAATACCATGTAAAGGAGTTCGAGAGGACATTTGATGTGAAGTTTGCAGCTTGTTCGATTGCTGCAAAAAAGCACATCGATCAAAGTACAACTATCCTCGATGTGCAGGGAGTGGGGCTTAAAAGCTTCAACAAACATGCTAGGGAACTCGTTACTCGTCTTCAGAAGATTGACGGTGATAACTATCCTGAGACCTTGAACCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGAATACTGTGGAACACCGTAAAATCATTCCTTGATCCTAAGACCACAGCAAAAATCAATATGGTTCACAGCGGTGCTCACAAATGCTCAAGAAAGGGTGACTCACACGAGGAAGAGAAATCAATCGCTGAGGAACCCGAGACTCCCAAGTTCGAGGCAGCCCCTCAGGTTGCTCCCGTTGCTGAAGTGGTCACTGCTACTATTGAAGCCCCCAAGCCTGTGGATCCGTGGTGTCCAGTGTCTATCAAAGGCTCTTCTGCTCAATCGCTTTTGACCAATTTGCCTGCAACGTGCTTGTCTCCTGCAGAGTTTGCGACTGTGATGAAACGCATGGCTGAGTTGGAGGAAAAAATGGTGACCATGAATAAGCAGCCTGCAGCCATGCCACCCGAGAAGGAGAAAATGCTTAATGCAACTATGACTCGGGCCGATGACTTGGAGCAGCAACTTTTGGCCACCAAGAAGGCTCTGGAGGATTCACTTGTTAAGCAAGAAGAGCTTTCTGCTTACATTGAGAAAAAGAAGAAGAAGAAGAGATTCGTATTACTTCTTTTAAATAAGCAAATGAAATCAGTGGATGGCCGAAGTGGAGGTCGAGAGATCAACGGGGAATTAAGTTTTAGTTTTGTGCCTTTCAGGAAGATTTTCCAAATGCCCTCTAACACAATGTTCCTACATGAGAACTAG 1368 0.4459 MSGSFKQKLRNSLTKKGRRSSKVMSIEIEDVHDAEELKIVDEFRQALILDELLPAKHDDYHMMLRFLKARKFDVEKTKEMWTEMLKWRKEFGADTIQEDFDFKEIDEVLQYYPQGHHGVDKEGRPVYIERLGQVDAGKMMQVTTMDRYIKYHVKEFERTFDVKFAACSIAAKKHIDQSTTILDVQGVGLKSFNKHARELVTRLQKIDGDNYPETLNRMFIINAGSGFRILWNTVKSFLDPKTTAKINMVHSGAHKCSRKGDSHEEEKSIAEEPETPKFEAAPQVAPVAEVVTATIEAPKPVDPWCPVSIKGSSAQSLLTNLPATCLSPAEFATVMKRMAELEEKMVTMNKQPAAMPPEKEKMLNATMTRADDLEQQLLATKKALEDSLVKQEELSAYIEKKKKKKRFVLLLLNKQMKSVDGRSGGREINGELSFSFVPFRKIFQMPSNTMFLHEN 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00737 455 MobiDBLite consensus disorder prediction 254 280 - -
Vian10g00737 455 Pfam CRAL/TRIO, N-terminal domain 5 83 IPR011074 -
Vian10g00737 455 SUPERFAMILY CRAL/TRIO N-terminal domain 32 100 IPR036273 -
Vian10g00737 455 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 6 402 - -
Vian10g00737 455 CDD SEC14 105 255 IPR001251 -
Vian10g00737 455 Coils Coil 331 351 - -
Vian10g00737 455 SMART CRAL_TRIO_N_2 59 84 IPR011074 -
Vian10g00737 455 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 104 277 IPR001251 -
Vian10g00737 455 SMART sec14_4 104 284 IPR001251 -
Vian10g00737 455 MobiDBLite consensus disorder prediction 254 274 - -
Vian10g00737 455 Pfam CRAL/TRIO domain 110 250 IPR001251 -
Vian10g00737 455 Gene3D - 12 91 - -
Vian10g00737 455 Gene3D - 92 265 IPR036865 -
Vian10g00737 455 SUPERFAMILY CRAL/TRIO domain 104 251 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00737 Vian-Chr10 7166323 7169997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00737 40 258 Acyl Lipid Metabolism Gene Families AT5G47730 28.070 1.68e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00737 K26544 - gmx:100796901 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00737 10 7166323 7169997 Vian10g00737 10 7166323 7169997 ECH