Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00719 ATGGCCGGAAAAGACAGAATCCTCGTATTGGGACCGACAGGGGCCATCGGAAGGCACATTGTGTGGGCAAGTGTGAAGGCGGGGAATCCAACGTATGTGTTGGTTAGGGACACTCCAGCCAATGTTAACAAACCAAGGCTCGTCACAGCTGCAAATCCTGAAACCAGGGATGAACTCCTTCAGAACTTCCAAAATTCTGGAGTTTTTCTAATTCAAAGATTCTTCCCATCTGAATTTGGACTGGATGTGGATCGTCACGATGCAGTTGAACCAGTGAGAGAAGTTTTTGAGGAAAAAGCAAAAATCCGGAGAGTAATCGAAGCCGAGGGAGTCCCTTACACTTACCTATGCTGTCATGCTTTTACCGGTTACTTCTTACGTAACCTGGCACAGATTGATATCACTGTTCCTCCTCGGGACAAGATATTCATTCAAGGAGATGGAAACGTGAAAGGTGCATATGTGACCGAGGCTGATGTGGGGACTTACACAGTGGAAGCAGTGAACGACCCTAACACATTGAACAAAGCCGTACATATAAGACTTCCTGCTAATTATTTGACCTTAAATGAGATTGTGTCTTTGTGGGAGAAAAAGATTGGGAAGAGGCTTGAGAAAATCTATGTTCCAGAGGAAAAGGTTCTGAAGGATATTCAAGGTAAAGTTGTCTTTTCCAAACAATTACCTGTTGGCATTGTATCACTCACAGCAGATAAGGCAGTGTACGAGATTGATCCCAGCAAAGATGTTGAGGCTTCTGAGGCTTATCCTAACGTTAAATACACCACCGTAGATGAATATTTGAACCAGTTTCTCTGA 819 0.4396 MAGKDRILVLGPTGAIGRHIVWASVKAGNPTYVLVRDTPANVNKPRLVTAANPETRDELLQNFQNSGVFLIQRFFPSEFGLDVDRHDAVEPVREVFEEKAKIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQIDITVPPRDKIFIQGDGNVKGAYVTEADVGTYTVEAVNDPNTLNKAVHIRLPANYLTLNEIVSLWEKKIGKRLEKIYVPEEKVLKDIQGKVVFSKQLPVGIVSLTADKAVYEIDPSKDVEASEAYPNVKYTTVDEYLNQFL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00719 272 Gene3D - 118 268 - -
Vian10g00719 272 Pfam NmrA-like family 71 261 IPR008030 -
Vian10g00719 272 CDD PCBER_SDR_a 6 267 IPR045312 GO:0016491
Vian10g00719 272 Gene3D - 6 71 - -
Vian10g00719 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 218 IPR036291 -
Vian10g00719 272 PANTHER PINORESINOL REDUCTASE-RELATED 3 72 - -
Vian10g00719 272 Gene3D - 72 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00719 Vian-Chr10 6969143 6970478 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00719 K23050 K05281 gmx:100781863 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00719 10 6969143 6970478 Vian10g00719 10 6969143 6970478 ECH