Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00703 ATGGAGGCCGACACTATGGCCATGGAATCAACGGAGTTAAAGGTGTCTGAGCTATTGAAAGAGGTCAACGTAGATTACTCTCCTCAGTTCAGTAAGCTCGTTGACAATACCGTTTCCGCCATCAAAGCCTCCATAGACAAAATCCCCAACGATTTCAAGGTAACTGCAGATTTAGCATCGCGGTTTGTTGCGGACATTGGCGCCGATAAGGTCGAGTTTAAGTTTAAGAAGCCAGAGTTAATCAAGACTGGTGGGAGTTACTCCACACAGAGTATTGCGAGGCCTGAAGTTAATGCTGATCTTATTATCAGGTTACCAAAGAAGTATTTGGAGAGGTCTTCATCTATTGATAGGGTTGAATGGTCCACTATGCACAATGAAGCCAGAAAACCCTTGCTCATTGTATATCCAGCTGCGAAGCTTGTTGAAGTTCCTGGTTTTTTTGTAAGAATTATTCCGTCCGCGAAGGCTATATTTAGCGTAGCGAAGTTGAACCTGAAGCGCAACAACATTCATAACCTGAGTAATGGGATTGATCTTCAGGCTACACCGAAGTACAATTCTAGTATTCTGGAAGACATGTTTATAGAGGATGCTGAATTCGTGAACAAGTATTTTGTTGGATGGAAGGAACTAAGGGAGGCTTTAATCCTGCTTAAGGTTTGGGCCCGGCAAAGAAGTTCAGTATATGTTCATGATTGCCTGAATGGGTTTTTGATTTCTGTCATACTGGCATACCTTGCTTCTAAGCAGCATATTAGCAATTCAATGAAGGCTACTGAAATAATCCGCGTCACCTTGAACTTCATTGCAACCTCAGAGTCGTGGAACCGAGGGTTATACTTTCCAAAGGAAGGCCAGATCCATATTACGAAGGAGCAAAAGATTCAACTTAGAGAGTCATTTCCAATTCTCATATGTCATCCATCTGGAGGATTCAATCTAGCTTTCCGAATGTCCAGGATTGGTTTTACTCGGCTTCAAGAAGAGGCTGCTATGACACTTAGGTGCTTAGAAAAGTGTAGAGATGGTGGATTTGACGAAGTTTTTATGACCAAGATTGACTATGCTGTTAAGTATGACTATTGTATGAGAATAAATTTTAAGGGAAAGAAGGAGGTATTTGCACTGGGATTTTGTTTGGACGATGAGTGCTGGAGAGCATACGAGGATAAAATACATGGTATTTTATCTAAAGGGTTAAATGATAGAGCAAGAGCCATTCAAGTTACATGGAGAAATACACAATGCCAGTGGAGTGTGGACGATGGCTTGTCGGTATTTGATAAAGAGCCCTTATTCATTGGAATTTCAGTGAGTACTTTGGAGAAAGCATATAGGATGGTTGATATCGGCCCAAATGCTGAAAGTAAAGAAGAGGCTCTTGAATTTCAAAAGTTTTGGGGAGAGAAAGCAGAGCTTCGAAGATTTAAAGATGGTAGAATTGCAGAAAGCACAGTATGGGAAAGTGAGCAATGGGCTAGATATCTTATTTTGAAAAGAATAGCGGAGCATGTACTTAGTCGACATCTTTCTCTGTCCATGGAAGATATTGTAGTTGTTGTGGATCAACTTGATTTCTCTTTGATTCACAGTGCTGGAGATCCTATATCATACGCTGGTAGTTTGCTTGGGGCATTTGATGTTTTATCAAAGCGCTTGCGTCTTATTGAAGACCTTCCATTGAAGGTGTCCAGTGTACTGCCTTTAGACTCTGCTTTTAGGTATACATCAGTGTTCCCTCCGGAACCTCATCTTCTGGCTAATGAAAAAATTGAATCTCTGAGATTGAATAAGTTTGTTCCATCATGCATTCAAGCACTGGAAGTTCTGATTCAGCTGGAAGGTTCTGGGAACTGGCCAATGGATGAAATTGCAATTGAAAAAACAAAATCTAGCTTCCTTTTTCAAATTGGATTGAGTCTTCAAAAGAAGTGGGGGATGACATGCACTGCCACTGAGGATAATGTGGACGTACTAATGTCAGGATATGCTTTCCGTCTAAAAATTTTGCATGAGAGAGGCCTTAGCTTGCTAAAAAAGGAAGTTGGGGATGTTCCGGCTAAGCAAGTTTCTTCCATTGACAAGGACCTTTTTATCCGTAGTCAACATGCTAATATGATCAATGGATTACAAAGTCGTTATCCAATATTTGGACCAGTAGCTAGACTTGCAAAACGATGGGCTGCTTCACATCTATTTTCAGCTTGCTTGGTAGAAGAGGCTGTCGAACTATTGGTTGCATATCTTTTTCTTAATCCTTTGCCATTTGATGTTCCCTGTTCACGGATCACTGGGTTTTTGAGGTTCCTGCGATTACTCTCAAACTATGATTGGGCTTTCTCTCCATTGGTTGTTGACATAAATAATGACTTGAGCCAAAGTGACGAGAAAGAAATAAATGACAACTTTTTGGTAAGAAGAAAAAGTCAGGGTGAGAGCGGACAAAGTGTAGGACAAGCAATGTTCTTAGCTACAGTTTACGATAAAGAATCTGAGGCTTGGACTGGATTATCACCTAGTGGAATGGAACTGAGAAGGTTAGTTGCATATGCCCGAAGCAGTGCCAATTTGCTGACAAAACTCACATTTCAAGAAGAGTTTGGTCCATACCGATGGGAGTGCCTTTTCAGGACTCCTTTAAACAATTATGATGCAGTAATTCTTCTCCACAAGGACAATCTCCCGTATCCCCAAAGGCTTCTCTTCCCTTCAGAAGTTAATCATGGAATACATGTTGCAGAAGGACAAGCCAGCAAGTGTTTTCAACCCTTTTTGTTGCCTAAAGATTTGAAGGGCAGGCCAGATGAACTTAAAAATAAGTTGCTGGTGGATTTTGATCCATCAAAGTGCTTTATCAGAGATTTAAAGGCAAGTACACATGAGTTCTCAGCCTCATTCCAAGTATGGCATGATTATCTGGGAGGCGATATTATTGGCCTAACATGGGGGGAATCATATTCTTCCAAGAAGCGAAAGCACGTGGAAGTGGTTGATGAAGAATATAATCCTTTGAAGGTGTTAAAAGCAGTGGGGGAAATTGGGAAAGGATTTGTGAGGAGTGTATACTTTCTTAAGCCCCCAAGGCTCAGGGATTAG 3099 0.4111 MEADTMAMESTELKVSELLKEVNVDYSPQFSKLVDNTVSAIKASIDKIPNDFKVTADLASRFVADIGADKVEFKFKKPELIKTGGSYSTQSIARPEVNADLIIRLPKKYLERSSSIDRVEWSTMHNEARKPLLIVYPAAKLVEVPGFFVRIIPSAKAIFSVAKLNLKRNNIHNLSNGIDLQATPKYNSSILEDMFIEDAEFVNKYFVGWKELREALILLKVWARQRSSVYVHDCLNGFLISVILAYLASKQHISNSMKATEIIRVTLNFIATSESWNRGLYFPKEGQIHITKEQKIQLRESFPILICHPSGGFNLAFRMSRIGFTRLQEEAAMTLRCLEKCRDGGFDEVFMTKIDYAVKYDYCMRINFKGKKEVFALGFCLDDECWRAYEDKIHGILSKGLNDRARAIQVTWRNTQCQWSVDDGLSVFDKEPLFIGISVSTLEKAYRMVDIGPNAESKEEALEFQKFWGEKAELRRFKDGRIAESTVWESEQWARYLILKRIAEHVLSRHLSLSMEDIVVVVDQLDFSLIHSAGDPISYAGSLLGAFDVLSKRLRLIEDLPLKVSSVLPLDSAFRYTSVFPPEPHLLANEKIESLRLNKFVPSCIQALEVLIQLEGSGNWPMDEIAIEKTKSSFLFQIGLSLQKKWGMTCTATEDNVDVLMSGYAFRLKILHERGLSLLKKEVGDVPAKQVSSIDKDLFIRSQHANMINGLQSRYPIFGPVARLAKRWAASHLFSACLVEEAVELLVAYLFLNPLPFDVPCSRITGFLRFLRLLSNYDWAFSPLVVDINNDLSQSDEKEINDNFLVRRKSQGESGQSVGQAMFLATVYDKESEAWTGLSPSGMELRRLVAYARSSANLLTKLTFQEEFGPYRWECLFRTPLNNYDAVILLHKDNLPYPQRLLFPSEVNHGIHVAEGQASKCFQPFLLPKDLKGRPDELKNKLLVDFDPSKCFIRDLKASTHEFSASFQVWHDYLGGDIIGLTWGESYSSKKRKHVEVVDEEYNPLKVLKAVGEIGKGFVRSVYFLKPPRLRD 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00703 1032 Pfam Nrap protein domain 6 881 1022 IPR035371 -
Vian10g00703 1032 FunFam Nucleolar protein 6 186 356 - -
Vian10g00703 1032 Pfam Nrap protein PAP/OAS-like domain 212 353 IPR035367 -
Vian10g00703 1032 Pfam Nrap protein nucleotidyltransferase domain 4 541 712 IPR035369 -
Vian10g00703 1032 Pfam Nrap protein domain 3 357 512 IPR035368 -
Vian10g00703 1032 Gene3D - 185 356 - -
Vian10g00703 1032 Pfam Nrap protein PAP/OAS1-like domain 5 715 867 IPR035370 -
Vian10g00703 1032 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 3 111 IPR005554 -
Vian10g00703 1032 Pfam Nrap protein domain 1 109 198 IPR035082 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00703 K14544 - gmx:100776157 1799.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00703 10 6793639 6802764 Vian10g00703 10 6793639 6802764 ECH