Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00658 ATGATGGGAGGTCAATCAAGTAAGATACCTAGTAGTAGTGATGTTCCAACGCCCATAAAAATGGGTAGTCATTCTCTCTATGCGGATGATTTAAGTTCTTATGAAGCGGCATGTGTTGAAGATCCAAACTTGCAATCCCTTGATGCTACCATTCAGGAGCGCACCAACAAGGTGATCTCCTCTCTTGCTAGTGGGATTGAGGTTCGTTCCATATCCATCGAGTCACTGGGGGAAGTGACTGGTAGTTTGCTTGATATGAATCGGGATGTTGCCAAAGTTATTCTAGAATGCAAGCAAGATATATTGAATAAGAAGGACAAGGAGTTGTTCTCCTTGGTGGGGGAATTCTTTGAAAATAGCCTCCAGACATTGAAATTCTGCAATAATCTTGACAAATGCTTGAATCGAGCACGCGAAAGGCATGTTATAGTTAAATCTGCAATTACCTATTTTGAGGAAGAGGTGCAAAATGGGGTTGAAGGGTCTACTTATTTGAAGACATTGCAAGAGCTTAAGGGTTTCAAGGAAGCTGGGGACCCTTTCACTGAAGAGTTTTATTCCTTGTTTCAATCAGTTTATGAAAAGCAAGCGTCAATGCTGAAGAAACTGCAGATCAGAAAGCAAAAGCTTGATAAGAAATTGAAGTCCCTCAAGACACTGAAGAGGGTCTCAAATGCTATTTTCGTTGCTGCCTTCGTGTCTGTATTGATTTTCTCAGTGGTGGCAGCTGCAATTGCTGCACCACCTGTTGTAACTGCTTTGGCTGGTGCTCTGGCTGTTCCGGTAGGCTCAGTGGGGAAATGGTGTGACTCACTTTTTAAGCGATATGAGACAGCTCTGAAGAGCCAAAGAGATTTAATCAGTTCTATGCACGCTGGTAGTTACATTACATTGGTGGACTTGGACAACATTCGGGTGCACATTGACCAATTGGAAATAAAGATTGAATCCATGTTGCAGAGTGCTGATTTTGCTCTGAAAAATGAGGAAGGTGTTAGGTTTGCGATTGATGAGATTAAGAAGAATATAGACACTTTTGCAGAGACTATTGAGGCTTTGAGTAAGCAAGCTGACGAATGTAGTCGCCAGATAAGGAGAGCAAGGTCAGTGATTGTGAAAAAGTTTATTAATTACTCTGGTTGA 1143 0.4182 MMGGQSSKIPSSSDVPTPIKMGSHSLYADDLSSYEAACVEDPNLQSLDATIQERTNKVISSLASGIEVRSISIESLGEVTGSLLDMNRDVAKVILECKQDILNKKDKELFSLVGEFFENSLQTLKFCNNLDKCLNRARERHVIVKSAITYFEEEVQNGVEGSTYLKTLQELKGFKEAGDPFTEEFYSLFQSVYEKQASMLKKLQIRKQKLDKKLKSLKTLKRVSNAIFVAAFVSVLIFSVVAAAIAAPPVVTALAGALAVPVGSVGKWCDSLFKRYETALKSQRDLISSMHAGSYITLVDLDNIRVHIDQLEIKIESMLQSADFALKNEEGVRFAIDEIKKNIDTFAETIEALSKQADECSRQIRRARSVIVKKFINYSG 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00658 380 Coils Coil 193 220 - -
Vian10g00658 380 Coils Coil 336 370 - -
Vian10g00658 380 Pfam Protein of unknown function (DUF677) 44 374 IPR007749 -
Vian10g00658 380 Gene3D - 114 373 - -
Vian10g00658 380 PANTHER UPF0496 PROTEIN 3-RELATED 28 375 IPR007749 -
Vian10g00658 380 Coils Coil 301 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00658 Vian-Chr10 6344988 6346130 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00658 - - gmx:100819451 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00658 10 6344988 6346130 Vian10g00658 10 6344988 6346130 ECH