Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00470 ATGGCGGAGTTGTTAGCAACATTAGGGGATCTGGAGAGGGACTCATTCGTGCCTCTTCTCTCCAAGCTGATTGGGGAATCAAAGCACGTGCAGAACAACCCACCGGAGCTCGTTCCCGAGGAGGACAGAGTGGTGAAACACGTGTTGGACGTTCTATTACCCTTCAGCACCACCACCGGCGGCGGTCCCTTGCTCCTTAACCACGTCACCTACACTCCCGGACGGGGGAACCTCATCGTCGAGTACCCCGGCACCGTTCCCGGTAAAATCCTCTCCTTCGTCGGTTGCCACATGGACGTCGTCACCGCCAATCCCAACGATTGGGATTTTGATCCGTTTTCACTGAGCATTGATGGGGATAAGCTTCGGGGTCGTGGAACTACTGATTGTCTGGGCCACGTGGCACTTGTCGCGGAACTCATGAAAAAGCTCGGGCAAACCAAGCCGAATTTGAAATCATCTGTTGTTGCTGTTTTTATAGCCAACGAAGAGAATTCTTCAATTACTGGTATTGGTGTGGATGCGCTTGTCAAAGATGGTCTCCTCAATAAGCTGAAGAATGGCCCTCTGTACTGGATTGACACGGCAGATAAACAACCATGCGTAGGGACTGGTGGTATGATACCTTGGAAACTTCAGGTCACGGGGAAGCTCTTTCACAGTGGATTAGCTCATAAAGCTATTAATGCATTGGAGCTAGGCATGGATGCTCTAAAGGAAATCCAGTCCCGATTTTACCGAGACTTCCCACCTCATCCTCAGGAACAGGTCTACGGGTTTGCAACTCCATCAACCATGAAACCAACCCAATGGAGCTATCCAGGAGGTGGAATCAACCAAATTCCAGGGGAATGTACTATTTCAGGAGATGTTGACTCCATTCTACAAGTAAGCTACGTCTTACATGTAAAGGATGTAATGAAGAAGCTGCAAGAATACGTGGACGATATTAATAAGAATATTCAGAAGCTAGAAAGTAGAGGTCCAGTTTCAAAATATGTCCTACCCGATGAAAACATAAGAGGAAGCCTAACTTTAACTTTTAACGAGGCACTGTCTGGAGTTGCTTGTGATCTTAATTCTAAAGGTTTCCATGTTTTATGCAAAGCAACTGAAGAAGTGGTTGGGTACGTAAAGCCTTACTCGATTACTGGGAGTTTGCCTCTCATTCGGGAACTACAGGAAGAAGGTTTTGATGTCCAAACATCTGGCTACGGCCTAATGGCTACATACCATGCTGCGAACGAGTACTGCCTTTTCACGGATATGTCCCAAGGATATCGGGTCTTTGCGAGAATCATCTCTCAGCTGGAAGATTGA 1320 0.4742 MAELLATLGDLERDSFVPLLSKLIGESKHVQNNPPELVPEEDRVVKHVLDVLLPFSTTTGGGPLLLNHVTYTPGRGNLIVEYPGTVPGKILSFVGCHMDVVTANPNDWDFDPFSLSIDGDKLRGRGTTDCLGHVALVAELMKKLGQTKPNLKSSVVAVFIANEENSSITGIGVDALVKDGLLNKLKNGPLYWIDTADKQPCVGTGGMIPWKLQVTGKLFHSGLAHKAINALELGMDALKEIQSRFYRDFPPHPQEQVYGFATPSTMKPTQWSYPGGGINQIPGECTISGDVDSILQVSYVLHVKDVMKKLQEYVDDINKNIQKLESRGPVSKYVLPDENIRGSLTLTFNEALSGVACDLNSKGFHVLCKATEEVVGYVKPYSITGSLPLIRELQEEGFDVQTSGYGLMATYHAANEYCLFTDMSQGYRVFARIISQLED 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00470 439 Coils Coil 307 327 - -
Vian10g00470 439 FunFam Acetylornithine deacetylase, putative 10 201 - -
Vian10g00470 439 CDD M20_ArgE-related 11 437 - -
Vian10g00470 439 Gene3D Zn peptidases 7 191 - -
Vian10g00470 439 SUPERFAMILY Bacterial exopeptidase dimerisation domain 206 313 IPR036264 -
Vian10g00470 439 Gene3D - 206 326 - -
Vian10g00470 439 PANTHER ACETYLORNITHINE DEACETYLASE 3 438 - -
Vian10g00470 439 Pfam Peptidase family M20/M25/M40 94 435 IPR002933 GO:0016787
Vian10g00470 439 Pfam Peptidase dimerisation domain 203 319 IPR011650 -
Vian10g00470 439 SUPERFAMILY Zn-dependent exopeptidases 10 437 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00470 K01438 - gmx:100814676 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00470 10 4327118 4331107 Vian10g00470 10 4327118 4331107 ECH