Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00461 ATGGTTCCCAAAGTTTATGCTGGCCAGGAAATGGCAATGGTTGAGAATGATAATTGCATAATGAATGGTAACTGGAAGAAACGTGTGCATGTTTTTGGTGAGAGGGTGAGGAGAATTCCTACTAAGGCTTGGCAAACTACATGGAGGGTGGGACGTGAAGATCCAAGAAGGTTGATCCATGCAGTCAAAGTTGGTTTGTCCCTCACTCTGGTTTCTCTGTTGTACTTGTTGGAGCCATTTTACAAGAGCATTGGACAGAGTGCTATTTGGGCTGTCATGACTGTGGTGGTTGTGTTGGAATTCACAGCAGGGGCAACTTTGTGCAAAGGACTCAACAGAGGATTGGGAACACTGTTAGCAGGATTATTGGCATTTATTGTTGGGTATGTTGCAGATGCATCTGGCAGAGTCTCTCAAGCTATCATCATCGGAGCTGCAGTTTTTTTTATAGGAGCTCTAGCTACTTATATCAGGTTTATTCCCTATATCAAGAAGAATTATGACTATGGTATAGTTATATTTCTCTTGACTTTCAACCTTATTGCTGTCTCAAGCTACCGGGTTGATAATGTGTTGAAGATTGCACATGAGCGTGTATACACCATTGCCATAGGCTGTGCTGTTTGCCTTCTCATGAGTCTTCTGGTATTTCCAAATTGGTCAGGAGAAGACCTCCATAATTCCACTGTTTACAAGCTTGAAGGCCTTGCAAAATCTATAGAAGCCTGTGTGAATGAATACTTTTATGGAGAGCTAGAAGGATCTGGAGATATAAAATTGTCTGAGGATCCAATATACAAAGGTTATAAGGCTGTTTTGGATTCAAAATCCATCGATGAAACACTGGCATTGCATGCAAGTTGGGAGCCAAGGCACTCTAGGTACTGTCACAGATTTCCATGGCAGCAATATGTGAAAGTTGGAGCTGTTCTGCGTCAGTTTGGTTATACTGTTGTGGCCCTTCACGGCTGTTTGAGAACAGAAATTCAGACACCACGATCTGTGAGAGCCATGTTCAAGGACCCTTGCATTCGGCTTGCAGCAGAGGTATCGAAAGTACTGATAGAACTTTCCAACAGCATAAGGAATCGCCGGCATTGCTCTCCAGAAATACTGTCCGATCATCTGCACGAAGCCCTGCAGGACCTGAACACTGCCATAAAATCTCAACCTCGGCTCTTCTTGGGCCCGAAACACAGGCACAACCAAGCCAGCAACATGTTCAAAATAGCTGCCGAACAAGTTGGGCATGGAAAGACCTCCCTTTCAAGTGTTAAAACCGATTCTTCGGCATTGCTGGAGTGGAAAAACAAAAGGGTTACCACTGAACAGACAAAGGAATCAGAACGAAAGTCTCTGAGGCCCCAACTGAGTAAAATTGCAATCACTAGCCTTGAGTTCTCTGAGGCTCTTCCTTTTGCTGCATTTGCATCTTTGCTTGTGGAAACAGTTGCAAAACTGGATCTTGTGATCGAGGAAGTTGAGGAACTGGGGAGACTCGCATGCTTCAAAGAGTTCATACCTGGTGATGAATTTGTTGTCACTTGTGACGAGCCTCGAATTGACGTGTTTCAGAACCATTTACCATCTCATGGAGTGGACTAA 1605 0.4405 MVPKVYAGQEMAMVENDNCIMNGNWKKRVHVFGERVRRIPTKAWQTTWRVGREDPRRLIHAVKVGLSLTLVSLLYLLEPFYKSIGQSAIWAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGLLAFIVGYVADASGRVSQAIIIGAAVFFIGALATYIRFIPYIKKNYDYGIVIFLLTFNLIAVSSYRVDNVLKIAHERVYTIAIGCAVCLLMSLLVFPNWSGEDLHNSTVYKLEGLAKSIEACVNEYFYGELEGSGDIKLSEDPIYKGYKAVLDSKSIDETLALHASWEPRHSRYCHRFPWQQYVKVGAVLRQFGYTVVALHGCLRTEIQTPRSVRAMFKDPCIRLAAEVSKVLIELSNSIRNRRHCSPEILSDHLHEALQDLNTAIKSQPRLFLGPKHRHNQASNMFKIAAEQVGHGKTSLSSVKTDSSALLEWKNKRVTTEQTKESERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLACFKEFIPGDEFVVTCDEPRIDVFQNHLPSHGVD 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00461 534 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 41 506 - -
Vian10g00461 534 Pfam Aluminium activated malate transporter 48 498 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00461 Vian-Chr10 4248855 4251750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00461 34 506 Miscellaneous Gene Families AT4G17970 66.472 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00461 K25841 - gmx:100819748 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00461 10 4248855 4251750 Vian10g00461 10 4248855 4251750 ECH