Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00454 ATGGCAACCATTAATCTTTCTTCCGCAACTTCCCTGCTCTTCCAATCCGAACTCTCTCCCTCCAAACGCAGAACCAAACGAATCCCTAAAATCACCATTCTAGCAAACCACGCCCAACCGACCCAAATTAACTCCTCCAACGGCTCTCCCTCCGTCGGCAACGCAAACTCTTCGGTCGAGGTTCAGGTGAGTGATCATGGCGTGGGACAGGCAGGACCGAATTCCGAGGCGCGTAAGAAAACTAAGATCGTGTGCACGATAGGTCCATCCACGAGCTCACGTGACATGATATGGAGCCTGGCTGAAGCCGGAATGAACGTGGCGCGTTTGAACATGTCGCACGGGGACCACGCCTCGCACCTGCAGACTATTGAATTGGTGAGAGAGTACAATGCTCAGTTTCAGGATAAGGTCGTGGCCATCATGCTCGACACCAAGGGTCCTGAAGTTAGAAGCGGGGATGTGCCTCAACCAATTTCACTTAAAGAGGGGCAAGAATTCTATTTCACCACCAGGAGAGGGGTCAGCACGGAAAGCACAGTTAGCGTGAATTATGATGATTTTGTGAATGATGTGGAGGTTGGAGATGTGTTGTTGGTTGATGGAGGAATGATGTCTCTTGCTGTAAAGTCAAAGACAAAAGACTTGGTTAAATGTGAGGTAATTGATGGTGGTGAACTGAAATCTAGGCGTCATTTAAATGTCCGTGGAAAAAGTGCTACACTTCCTTCCATAACTGACAAGGACTGGGAAGATATCAAGTTTGGGGTGGACAATCAAGTAGACTTCTATGCTGTCTCATTTGTCAAGGATGCTAGAGTGGTGCACGAGTTAAAAGAGTACCTCAAAAGTCATAATGCTGATATACACGTGATTGTAAAAATTGAAAGTGCAGATTCCATACCAAATCTTCATTCCATACTTTCTGCTTCAGATGGGGCCATGGTTGCTCGTGGGGATCTTGGAGCTGAACTTCCAATAGAGGAAGTTCCTTTATTGCAGGAGGACATCATAAGGAGATGTCAAAGCATGCAAAAGCCAGTTATTGTGGCAACAAATATGCTTGAAAGCATGATTAATCATCCCACGCCCACAAGGGCAGAAGTCTCGGACATTGCAATTGCAGTAAGACAAGGTGCTGATGCTATCATGCTTTCAGGGGAAACTGCACACGGAAAATTTCCTTTGAAAGCTGTTAAAGTTATGCATACGGTGGCTCTTAGGAACGAATCCAGTGTTGAAAGCGGTGCTGCTTGTCCAAGTCTGAGTTCCCATAAAAGCCACATGGGAGAAATGTTTGCTTTCCATGCGACAACAATGTCTAACACTCTTAATACCCCCATTATTGTTTTCACCAGAACAGGATCCATGGCTACTCTATTGAGCCATTATAGGCCTTACTCAACAATCTTTGCATTCACAAATGAAACAAGGATTAAGCAGAGGTTGGCACTTTATCATGGCGTTGTGCCTATATACATGCAATTTTCAAATGATGCAGAGGAGACTTTCTCTAGAGCCCTCGAGCTACTATTGAGTAAGGGTCATTTACACGAGGGACAGCATGTTACACTTGTTCAAAGTGGAGCACAACCAATATGGCGTGAGGAATCCACTCACCACATACAAGTTCGTAAGGTTCATGAATAA 1650 0.4533 MATINLSSATSLLFQSELSPSKRRTKRIPKITILANHAQPTQINSSNGSPSVGNANSSVEVQVSDHGVGQAGPNSEARKKTKIVCTIGPSTSSRDMIWSLAEAGMNVARLNMSHGDHASHLQTIELVREYNAQFQDKVVAIMLDTKGPEVRSGDVPQPISLKEGQEFYFTTRRGVSTESTVSVNYDDFVNDVEVGDVLLVDGGMMSLAVKSKTKDLVKCEVIDGGELKSRRHLNVRGKSATLPSITDKDWEDIKFGVDNQVDFYAVSFVKDARVVHELKEYLKSHNADIHVIVKIESADSIPNLHSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCQSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVRQGADAIMLSGETAHGKFPLKAVKVMHTVALRNESSVESGAACPSLSSHKSHMGEMFAFHATTMSNTLNTPIIVFTRTGSMATLLSHYRPYSTIFAFTNETRIKQRLALYHGVVPIYMQFSNDAEETFSRALELLLSKGHLHEGQHVTLVQSGAQPIWREESTHHIQVRKVHE 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00454 549 Pfam Pyruvate kinase, barrel domain 79 415 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian10g00454 549 SUPERFAMILY PK beta-barrel domain-like 148 239 IPR011037 -
Vian10g00454 549 Gene3D - 79 409 IPR040442 -
Vian10g00454 549 Gene3D - 410 527 IPR036918 -
Vian10g00454 549 MobiDBLite consensus disorder prediction 36 56 - -
Vian10g00454 549 SUPERFAMILY PK C-terminal domain-like 397 547 IPR036918 -
Vian10g00454 549 PANTHER PYRUVATE KINASE 72 525 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian10g00454 549 FunFam Pyruvate kinase 149 242 - -
Vian10g00454 549 ProSitePatterns Pyruvate kinase active site signature. 289 301 IPR018209 GO:0004743|GO:0006096
Vian10g00454 549 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 77 412 IPR015813 GO:0003824
Vian10g00454 549 Gene3D - 148 243 IPR015806 GO:0004743|GO:0006096
Vian10g00454 549 FunFam Pyruvate kinase 244 409 - -
Vian10g00454 549 NCBIfam pyruvate kinase 79 547 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian10g00454 549 PRINTS Pyruvate kinase family signature 368 386 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian10g00454 549 PRINTS Pyruvate kinase family signature 387 403 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian10g00454 549 PRINTS Pyruvate kinase family signature 318 342 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian10g00454 549 PRINTS Pyruvate kinase family signature 261 275 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian10g00454 549 PRINTS Pyruvate kinase family signature 343 367 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian10g00454 549 PRINTS Pyruvate kinase family signature 137 153 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian10g00454 549 PRINTS Pyruvate kinase family signature 291 317 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian10g00454 549 Pfam Pyruvate kinase, alpha/beta domain 438 527 IPR015795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00454 Vian-Chr10 4167904 4182694 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00454 K00873 - gmx:100776984 916.761