Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00450 ATGAAGGCAAAGAGAGGGAAACGCTCTGAGGCATTCTGGCCTTCCATTGTGATGAAGAAATGGTTAAACATCAAGCCCAAGGTGAATGACTTCAGTGAAGATGAAGTGGACACTGAAACTGAGAGTGAAGATGATGCTTGCTCTCTTAGAGGCTCAAGAATGCGTGAAGATAAACCCTCCCTTAGAGCACAAGAGATTCCATCCAAATTCTCAACTCAAAGATCAGGCAATTCTCCGTTCCTTTTCAGCAATCCGAATTCCCTGGCAGAAACAAAAGATGCATCTAGTAAGGGCTACAAGGCAAGACACAGAAGAGGAAAATCTGAAACTCTGCGAGCTCAGTACATAAACACAAAGGAAGTGAGGGTAACAATTGGCACATGGAATGTTGCTGGAAGACATCCCTCTGAGGATCTTGAAATTGATGACTGGCTCTGTACTGAAGACCCAGCTGATATTTACATTCTTGGCTTTCAGGAGGTAGTTCCACTGAATGCCGGAAATGTGCTTGGAGCAGAAGATAATACACCTATCCCAAAATGGGAGGCAATCATTAGGAGATCTCTAAACAAATCTTCTGAGCCTGACAGTAAACACAAAAGCTACAGTGCCCCTCCTTCTCCAGTGTTAAGAACTTCTTCTGCAGCTGATCTCCTAGCAGACACTATAGACGTTGATAATCCAATTCCAATAGATATGATGATTGAGGAATTTGTGGGAACAGTAGAAAATGACGAGGTGAAACAGCACGAAGTGAAGAGCATAATTGATATAGAGAATAACTTACAGTTGAGGAGAATATATGGCATTGATATTGACTGGCCTGAACGCTCATTGGATGCAATCCCCCAAATTGTTGATTCCAACTCAAAGTTGCGGAGAGTACTAAGCAGTTCAGCCAGAATTGGCTTTAATAGGACTGAAAGTACTTTGAAATATAGTGTTGGATTGAAACGTTCACACCACAGTTCTGGAAACTTGGGCTTGTTGTGGGAAGAACAGCAAGTGATACCTGAAGTAGCTGATTCCGTCTCTGATTTGTTATCAGCTGAGGATGATGATGCTTTCATTGAAATGGTGAACACCGAAGATGATAATGAACTAGGTACCATGAAATCTTGTGGAAATCCTAGGTATGTCAGGATTGTGAGCAAGCAAATGGTAGGGATATATGTATCTGTTTGGGTTCAGAGGAGATTGAGAAGGCACATTAACAATTTGAAAGTTTCACCGGTTGGGGTTGGTCTTATGGGCTACATGGGAAACAAGGGGTCAGTTTCGATTAGTATGTCTCTCTTCCAGTCACGTTTGTGCTTTGTTTGTTCCCATTTGACTTCTGGTCAGAAGGAAGGAGCCGAACATAGGAGAAACTCTGATGTTCATGAAATTCTGAGACGCACTTGCTTCTCACCTGCCTTTGATGCAGATCAACCGCAAACAATCCCATCTCACGACCAGATTTTTTGGTTCGGGGATTTGAATTATCGTATCAATATGTTGGATGCTGAGGTTAGAAAATTGGTGGCTCTAAAGAAGTGGAATGAGTTGATGAATTATGACCAGCTAAGCAAAGAACTGCGTATTGGGCGTGTGTTTGATGGATGGAAAGAGGGTTTGATAAACTTCCCACCCACTTACAAGTATGAAATTAACTCTGATAGATATGTTGGTCAGAGCCCAAAAGAAGGGGAAAAAAGAAGATCTCCAGCATGGTGTGATCGTATATTGTGGCTAGGAAAAGGAATAAAACAGCTACAATATGGTCGTGCAGAAATTAAGCTCTCAGATCATAGACCAGTTAGTTCAGCCTTCTTGGTTGAAGTTGAAGTATTTGACCATCGCAAGCTAAAAAGAGCTCTAAATTTCACTAGGGCAGCAGTTCACCCAGAGATCTTCCTTGATGAAGATGGAGAGATATTAGAATTTCATTGA 1932 0.4187 MKAKRGKRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDACSLRGSRMREDKPSLRAQEIPSKFSTQRSGNSPFLFSNPNSLAETKDASSKGYKARHRRGKSETLRAQYINTKEVRVTIGTWNVAGRHPSEDLEIDDWLCTEDPADIYILGFQEVVPLNAGNVLGAEDNTPIPKWEAIIRRSLNKSSEPDSKHKSYSAPPSPVLRTSSAADLLADTIDVDNPIPIDMMIEEFVGTVENDEVKQHEVKSIIDIENNLQLRRIYGIDIDWPERSLDAIPQIVDSNSKLRRVLSSSARIGFNRTESTLKYSVGLKRSHHSSGNLGLLWEEQQVIPEVADSVSDLLSAEDDDAFIEMVNTEDDNELGTMKSCGNPRYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRLCFVCSHLTSGQKEGAEHRRNSDVHEILRRTCFSPAFDADQPQTIPSHDQIFWFGDLNYRINMLDAEVRKLVALKKWNELMNYDQLSKELRIGRVFDGWKEGLINFPPTYKYEINSDRYVGQSPKEGEKRRSPAWCDRILWLGKGIKQLQYGRAEIKLSDHRPVSSAFLVEVEVFDHRKLKRALNFTRAAVHPEIFLDEDGEILEFH 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00450 643 Gene3D Endonuclease/exonuclease/phosphatase 102 205 IPR036691 -
Vian10g00450 643 FunFam Type I inositol polyphosphate 5-phosphatase 2 318 630 - -
Vian10g00450 643 Gene3D Endonuclease/exonuclease/phosphatase 332 630 IPR036691 -
Vian10g00450 643 MobiDBLite consensus disorder prediction 190 209 - -
Vian10g00450 643 MobiDBLite consensus disorder prediction 32 107 - -
Vian10g00450 643 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 17 626 IPR045849 GO:0004445
Vian10g00450 643 MobiDBLite consensus disorder prediction 43 63 - -
Vian10g00450 643 FunFam Type I inositol polyphosphate 5-phosphatase 2 101 213 - -
Vian10g00450 643 SMART i5p_5 309 612 IPR000300 GO:0016791|GO:0046856
Vian10g00450 643 MobiDBLite consensus disorder prediction 65 93 - -
Vian10g00450 643 SUPERFAMILY DNase I-like 112 624 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00450 Vian-Chr10 4154564 4157936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00450 379 618 Acyl Lipid Metabolism Gene Families AT2G43900 29.787 2.36e-34 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00450 K24221 - ccaj:109800886 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00450 10 4154564 4157936 Vian1g01508 1 16713402 16717667 PCT