Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00445 ATGTCCTGGAACACTGTCGCTGAACCTTCCCTTGCGCCCCTTACAAGTAGTTCCAGAGCGAGATCGAAGGTTCTGTTCGACGAGGAGGCAGCGGTGGAAGGCGAGTGCAAGGAGCGCTCACGGTGGTGCGAAGGAGAGTCTACCATTAGACCCCTTCCTAGCGCGATCGGAGAAATTGCTATTGAAGGTGTCGGTACTGGAGATAATTCAGGCATTGACGCGAAATCGTTGATGGGAAGAGAACCCCCTCAGAATTTGTTACCATCCAAACACGACTTACCGAGATTGGTTCTCGTGCTCGCACTCGCATCGCTAGTTGCATGGACCTGCAATTTCCTATTTACCTCTCTCCTTCAACCTCCTTCCAAACCCTTTTGCGACACCAATTTCCACTCCTCCGATTACTTTCCTGATGTTTGTGAACCTTGTCCCAGTAATGGAGAATGCAACGATGGAAAGTTGGAATGCCTTCAGGGTTACCAAAGACATGGGAACTTGTGTCTAGAAGACGGAGATATCAGTGAATCAGCTCGAAAGATTGTGGAGAGAGTGGAACATCACTTGTGTGAGGGATATGCTCAATTTTTGTGCAGTGGAACCGGACCAATTTGGGTTCGTGAGGATGTTTTGTTGAATTATTTTGAGCCCGTGGGAAATGTCAAAGTGAACAATGCTCTTCATAATTATACAAAACAAAGGGCAGTTGAAACAATGGGGCAATTATTGGAGACGAGATTAAACAACTCTCATGGGATGAAGGAGTTTAAGTGTCCAGATCTGTGGGCAGTGCATTACAAGCCATATTCCTGCCGTATTCGTCAGTGGATCTCTCAGCATATTCTACTTGTTTTGCCCATTTGTGCCATGCTTGTTGGATGCACAGCTTTGTTCTGGAGTGTTCGACGGAAACTATCAATGTCAAGAAGAATTGAGGAGCTTTATGATAAGGTCTGCGAAATACTTGAAGAGAATGCATTGACGTCAAAGAGTGCAAATGGTGAATGTGAACCCTGGTTTGTTGCTTCTAGGTTACGTGATCACCTGCTTTTGCCAAGAGAACGGAAGAACCCTTTATTATGGAGAAAGGTAGAAGAATTGGTTCAAGAAGATTCGCGAATAGATTGCTATCCAAAGTTGGTGAAGGGTGAATCGAAAGTGGTATGGGAATGGCAAGTTGAAGGCTCTTTGAGCGTCTCAAAGATGAAGAGAAGAAGAGACGCAAGCAAAACAAGGGTCAAGGAAAGCATGGATATGAATCATCAGCAACATCCTGAAGTGAAAACAGAGCCTGTGGAACCACTTTTTTGA 1308 0.4526 MSWNTVAEPSLAPLTSSSRARSKVLFDEEAAVEGECKERSRWCEGESTIRPLPSAIGEIAIEGVGTGDNSGIDAKSLMGREPPQNLLPSKHDLPRLVLVLALASLVAWTCNFLFTSLLQPPSKPFCDTNFHSSDYFPDVCEPCPSNGECNDGKLECLQGYQRHGNLCLEDGDISESARKIVERVEHHLCEGYAQFLCSGTGPIWVREDVLLNYFEPVGNVKVNNALHNYTKQRAVETMGQLLETRLNNSHGMKEFKCPDLWAVHYKPYSCRIRQWISQHILLVLPICAMLVGCTALFWSVRRKLSMSRRIEELYDKVCEILEENALTSKSANGECEPWFVASRLRDHLLLPRERKNPLLWRKVEELVQEDSRIDCYPKLVKGESKVVWEWQVEGSLSVSKMKRRRDASKTRVKESMDMNHQQHPEVKTEPVEPLF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00445 435 PANTHER INNER NUCLEAR MEMBRANE PROTEIN HEH2-RELATED 90 411 IPR044780 GO:0003682|GO:0005637
Vian10g00445 435 MobiDBLite consensus disorder prediction 403 435 - -
Vian10g00445 435 MobiDBLite consensus disorder prediction 403 427 - -
Vian10g00445 435 Pfam Man1-Src1p-C-terminal domain 124 390 IPR018996 -
Vian10g00445 435 Gene3D - 295 390 IPR041885 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00445 - - gmx:100784375 649.047