Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00442 ATGGGTTTCAATGCTGATACGGTAACTAAAGAATTCCTTTATGACATTGTTGTTGGCAAAACCAAAGATGAAATAGCCTTGTCTCTCTTTCCTGATGATCTGCCACGACGTTTAAAGTTTATGGAAGATGAGGAAGCCCAGTTCCGGAAAGAGGTTTCACATGTGTGGACTAATGAAGGCTTTGAAAGAATGAGAAGATGGATTGAAAGACGTAAGTTTAAGAGAGCTGCAGTTACCAATTATTCAAGAGCACATGCAGAGCTCATTATCTCCAAACTTGGCCTCTCAGATTTCTTTGATGCTGTTATTACTAAAGACGAATGTGTACATAGCAAGCCTCATCCAGAACCCTACCTGAAAGCTCTTGAAGCTCTCAAGGCGTCAAAGGATCACTCGTTAGTATTTGAGGCTTCTTTTCCAGGGGTCAAAGCTGGAGTTGCAGCTGGGATGCCTGTCATTTATTTGGATTTTAAGTCACCATTTGATCTTTTGATGGAAGCAAAACCTGCATTTGTCATTAAGAATTATAAGAATCACAAATTCTGGGATGCTTTGTATGAACTTGAAAAGGCTGGTAGGGCTCCTTCAGTTTGA 594 0.404 MGFNADTVTKEFLYDIVVGKTKDEIALSLFPDDLPRRLKFMEDEEAQFRKEVSHVWTNEGFERMRRWIERRKFKRAAVTNYSRAHAELIISKLGLSDFFDAVITKDECVHSKPHPEPYLKALEALKASKDHSLVFEASFPGVKAGVAAGMPVIYLDFKSPFDLLMEAKPAFVIKNYKNHKFWDALYELEKAGRAPSV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00442 197 CDD HAD_BPGM-like 36 153 - -
Vian10g00442 197 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 2 189 - -
Vian10g00442 197 Gene3D Putative phosphatase; domain 2 6 53 IPR023198 -
Vian10g00442 197 NCBIfam HAD-IA family hydrolase 91 153 IPR006439 -
Vian10g00442 197 SUPERFAMILY HAD-like 26 176 IPR036412 -
Vian10g00442 197 Gene3D - 54 178 IPR023214 -
Vian10g00442 197 Pfam Haloacid dehalogenase-like hydrolase 18 154 IPR041492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00442 Vian-Chr10 4088036 4089053 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00442 - - var:108334764 389.037